Oncorhynchus keta (chum salmon): 118372413
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Entry
118372413 CDS
T09424
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118372413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118372413
03012 Translation factors [BR:
oke03012
]
118372413
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118372413
Translation factors [BR:
oke03012
]
Eukaryotic type
Release factors
118372413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
118372413
NCBI-ProteinID:
XP_035614168
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Position
2:complement(14121604..14144412)
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AA seq
585 aa
AA seq
DB search
MDPRDTAPDSWEQEEDAEARDAAGLQSALAALNVNAKPFVPNVNAAVFVPTFFQSSLTEI
PILDGHGAETVASMELSETVAPVENGGGTEADMMVEVETWEQKEEPGEGEPGGGGALGGE
GGSSEVVQGKEEEMMEEEEEEELPMLKVIPLPPDAPKKEHVNVVFIGHVDAGKSTIGGQI
MYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF
TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH
LIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPIE
ECTWYTGLPFIPHLDSLPSFNRITDGPVRLPIVDKYKDMGTVILGKLESGFIAKAQQLVM
MPNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFD
AQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCI
ARLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagccccggattcgtgggagcaggaggaggatgccgaggcccga
gacgccgcgggactccagtccgctctcgccgctctcaacgtcaatgccaagccgtttgtc
ccgaatgtcaacgcggcggtgtttgtaccgaccttctttcaaagcagcctcacggaaatc
ccaatactcgacggtcacggtgctgagacagttgccagcatggagctgtcagaaacagtt
gctccagtggagaacggaggagggacagaagcagacatgatggtggaggtggagacgtgg
gagcagaaagaggagcccggggaaggagaaccaggaggagggggagccctgggaggagag
gggggttccagtgaggtggtgcagggaaaggaggaggagatgatggaagaggaagaggag
gaggagctgcccatgctcaaagtaatacccctcccaccagacgccccgaagaaggagcat
gtgaatgtggtgttcatcgggcatgtggatgctggtaaatcaactattggaggtcagatc
atgtatttgacaggaatggtggagaaaagaaccctggagaaatatgaaagagaagccaaa
gaaaagaacagagaaacatggtacctgtcctgggctctggacaccaaccaggaggagaga
gacaaggggaagacggtggaggtggggagagcctactttgagacagagaaaaagcacttt
actatcctggatgcccccggccacaaaagctttgtccccaacatgatcggtggggcgtca
caggctgacctggcagtgctggtgatctcagccagaaaaggagagtttgagacaggcttt
gagaagggaggtcagacgcgggagcacgccatgctggccaagacggctggagtcaaacac
ctcatcgtcctcgtcaacaagatggacgaccccactgtcaactggagcttggaaaggtat
gaggaatgtaaagagaagttggtgccatttctgaagaaggtgggcttcaacccaaagaag
gacatctacttcatgccttgctctgggctgacgggagccaacctaaaggagcccatagag
gagtgcacatggtacacggggttgccattcatcccacatctggacagcctgccaagcttc
aacagaatcacagatggccctgtcagattacccatcgtagacaaatacaaggatatgggc
actgtgatcctggggaagctggaatctgggttcattgccaaagcccagcagctggtcatg
atgcctaacaggcacacagtggaggtgctgagcctgctgtctgacgaggtggagacagat
gaagctgttcctggagagaacttgaagctaaggctgaagggcatcgaggaggaggagatc
ctgcctggcttcatcctctgtaatgctgagaacctctgccactccggacgcacttttgac
gctcagattgtcatcattgagcataaatccatcatctgcccaggttacaacgcagtccta
cacatccacacctgtattgaagaagtacaaatcacagccttaatctgtctagtggacaag
aagaccggtgagaagagcaagacgcgacctcgctttgtcaaacaggaccaggtgtgcatc
gcccggctacgttgtgctggaaccatctgcctcgagaccttcaaagacttcccacagatg
gggaggttcaccctacgagatgaaggaaaaaccattgctattggcaaagtgctgaagctg
gtaccagagaaggactaa
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