Oncorhynchus keta (chum salmon): 118372468
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Entry
118372468 CDS
T09424
Name
(RefSeq) integrin beta-7-like
KO
K06590
integrin beta 7
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04514
Cell adhesion molecule (CAM) interaction
oke04672
Intestinal immune network for IgA production
oke04810
Regulation of actin cytoskeleton
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118372468
04514 Cell adhesion molecule (CAM) interaction
118372468
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118372468
09142 Cell motility
04820 Cytoskeleton in muscle cells
118372468
04810 Regulation of actin cytoskeleton
118372468
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
118372468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118372468
04515 Cell adhesion molecules [BR:
oke04515
]
118372468
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118372468
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin beta subunits
118372468
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
EGF_TEN
EGF_Teneurin
I-EGF_1
EGF_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
118372468
NCBI-ProteinID:
XP_052329500
LinkDB
All DBs
Position
21:complement(23280576..23291732)
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AA seq
767 aa
AA seq
DB search
MVGFFLLGTFILYCVGQIQIQGIPQICVSQPSCSACLRSPGCAWCKHKDFLKSGESTERR
CDTAESLRTRGCEQTDIINPQSELVFLKNNELSSDPDNVVQLKPQNLLFKLRVGVPQTFS
VSFKRAEGYPIDLYYLMDLSFSMRDDLDTIKNLGQEILSTLKNVTNKVRIGFGSFVDKVA
LPYVSQVKDKKKNPCPSRLYTCQPAFSFQNILGLTQDVAEFKTRVSNQIISGNLDSPESG
FDAIMQAAVCQGVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPNDGKCHLNGSGFYDG
TKYDYPSVGQLARVLAANNIQLIFAVTEDSVAAYKALSKLIPQSVLGVLKNDSSNVVQLI
LEAYSNLSSTILLEHHGAPLGLDVTYRSHCTPAEGDNTPWQRRGECMNVKLNQQVDFTVS
LNISMSEGECLKEKKQFVLKLQGISETLKVSVETLCDCDCHDTEQQSTHCNEKGTLNCGI
CSCDEDHLGQRCECEQPKDMISADSMDTTCRQDSSPLLCSGHGGCECGICVCQGTHRGDF
CQCDDNSCDRHNNMLCSGNGQCDCGTCKCHANYTGSACDCSTLTDQCRTAGKLCNGQGTC
QCNQCQCNNDFFGMSCSKIANACAKFLACVTCELANKESDGLKSNCSRPCGSVKPTWVEG
PQEFPCREDTISYKVELFPDGNILVLYADLPRSVDKTYVIIGSSVSSIIFIGIAVILISW
LMLEFHYRREYASFLKATETVVWKNIENPLFQDATTIVINPIHIQED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggttggcttctttttattaggaacctttattttgtactgtgtgggacagatccaaatt
caagggatcccccaaatatgtgtgtcccagccctcatgttcagcctgcctgaggagccct
ggatgtgcttggtgcaaacacaaggacttcctgaagtctggggagtccactgagcggagg
tgtgacactgctgagtctctgaggaccagaggctgtgagcagacagacatcatcaacccc
caatcagaactggtcttcctaaagaacaatgagctcagcagcgacccagacaatgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagtcggagtccctcagaccttcagt
gtgtcattcaagagagccgagggctaccccatagacctgtactacctaatggacctgtcc
ttctccatgagggacgacctggacaccatcaagaatctgggccaggaaatcctctctacg
ctaaaaaacgtcaccaataaggtccgcataggctttggctcatttgtggacaaggtggct
ctgccgtatgtcagccaggttaaggacaagaagaagaacccctgtcccagccgcctgtac
acctgtcaacctgccttcagcttccagaacattctgggactaacccaagacgtggccgag
ttcaagaccagggtcagcaaccagatcatctctggaaacctggactcccccgagtctggc
tttgacgccatcatgcaggcagctgtctgccagggtgtgattggttggaacaatgtcacc
cggatcctggtttacacgtcagatgacaccttccacattgccggggacggcaggctggct
gggatattcgaacctaatgatgggaagtgtcatctcaatggcagcggcttctacgatggc
actaaatatgactacccatcggttggccagctcgccagggtcctggcagccaataacatc
cagctcatctttgctgtcaccgaggacagtgttgctgcctacaaggcattgagtaagcta
atccctcagtcagtgctgggagtcctgaagaacgactccagcaacgtggtccagctcatc
ttagaggcctacagtaacctgtcctccactatcttattggagcaccatggagccccctta
ggtctggacgtgacctacagatcccactgcacccctgcagaaggggacaacaccccgtgg
cagaggaggggcgagtgcatgaacgtcaagctcaaccagcaggttgacttcacagtgagt
ctgaatatttcaatgtctgaaggagaatgtctgaaggagaagaagcagtttgtcctcaaa
ttgcagggcatcagcgagaccctgaaggtctccgtggaaaccctgtgtgactgtgactgc
catgacacagaacagcagtccacacactgcaatgaaaagggaacgctcaactgcggaatc
tgcagctgtgacgaggaccacctgggtcaaaggtgtgagtgtgagcagcctaaggacatg
atctctgccgactctatggacacaacatgtcgccaagacagctccccgctgctatgtagc
gggcacgggggctgtgagtgtggcatatgtgtgtgccagggaacccaccgtggtgatttc
tgccaatgtgatgacaacagctgtgaccgccacaacaacatgctctgcagtggtaatggg
cagtgtgactgtggaacatgtaagtgtcatgccaactacacaggctctgcgtgtgactgt
tccaccctcactgaccagtgcaggactgctgggaagctgtgcaatggccagggaacatgc
cagtgtaaccagtgccagtgcaacaatgacttctttggcatgagctgctcaaagattgct
aatgcatgcgcaaaattcctggcctgtgtgacgtgtgaattggccaataaggaaagtgat
ggactaaagagtaactgtagccgaccatgtggctcagtcaagcccacttgggttgaggga
ccccaggagttcccttgcagagaagacaccatctcctacaaagtggagctgttccctgac
ggcaacatcctggtcctctacgcagatctgccccgctctgttgacaagacttatgtgatc
attggcagctcggtgtccagcatcatcttcattgggatcgcagtgatcctcatcagctgg
ctgatgctggagttccactaccggagagagtacgccagcttcctcaaagcaacggagact
gtagtctggaaaaatatcgaaaatcctttgttccaggacgccacaaccatagttataaac
cccatacacattcaagaggactga
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integrated database retrieval system