Oncorhynchus keta (chum salmon): 118372511
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Entry
118372511 CDS
T09424
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118372511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118372511
Spliceosome [BR:
oke03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118372511
Complex C
U4/U6.U5 tri-SnRNP related factors
118372511
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
118372511
NCBI-ProteinID:
XP_052332309
EnsemblRapid:
ENSOKEG00005048475
LinkDB
All DBs
Position
23:complement(11525455..11538449)
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AA seq
515 aa
AA seq
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MANNTVAGNQQQGQAVNKIGPNPGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
LKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKMIDTQMKARPRKAPEKVEEPVEPVPEEGRA
TEGRRRSRSPRRSPKRSRSRSHHRERERHGPSFDRELERERDRQRKEREGKDGDRRGGDR
ERGEKERDRGGERERRRSRSRERKGERKDREKEREGGGENDRSRRKDRGSDRGRERSKDK
RSKGETEDRRHKEERDERRGHREERKAKRSSRSGSRERRHKEKSKKRGEVQEESGSKSRA
EVGEKEKSRAEVGEKEKSRAEVGEKEKSRKRERSHERGDGEQRSHKRSRSKERSHRPREP
SNGKAHGKHRERRRSQSMDRGERTTQRAQEEPEHG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtagccgggaatcagcaacaaggacaggctgtgaacaagattggc
cctaaccctggaaaacatggcaacaacttgcctctctggggaaacgaaaagactatgaac
ttgaaccctatggtcctcaccaacgtgctctcatctccatatttcaaggttcagctctat
gaactgaaaacctaccatgaggtggtggatgaaatatatttcaaggtgactcatgttgag
ccctgggagaaaggcagcaggaagactgctggacagactggaatgtgcggaggggtgcgt
ggagtcgggacaggcggcattgtgtccacggccttctgcctgttgtataagctgtttacc
ctcaagatgacccgcaagcaggtgatgggactgataactcacaacgactcgccctacatc
agagcacttggtttcatgtacataagatacacccagccccctgcagacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggcggctgcgtc
atgaccatcggtgagatggtccggtcgtttctcaccaagctggagtggttctccacactt
ttcccacgcatcccggtgcctgtgcagaagatgattgacacacagatgaaggcaaggccc
cggaaggctcctgagaaggtggaggagccggttgaacctgtgccagaggagggacgggcg
acagaagggcgtagacgctcccggagccccaggaggtcccccaaacggtcgaggagcagg
agccaccaccgcgaacgagagcgccacggcccaagcttcgaccgcgagctggaaagggaa
cgtgaccgccagaggaaggagagggagggtaaggacggggacaggagaggaggggacagg
gagagaggggagaaagagagggacaggggaggagaaagggagaggcgacggtccaggagc
agggaacgcaagggagagcggaaagacagggagaaagaaagggaggggggcggggagaac
gacagaagcaggaggaaagacaggggcagtgacagagggagggagaggtccaaggacaag
aggagcaagggagagactgaggacaggagacacaaagaagagcgggatgagaggaggggg
cacagggaggagaggaaggccaagcgctccagtcggagcggaagcagggaaaggagacac
aaggagaagtccaagaagagaggagaagtccaagaagagagtggaagcaagagcagggcc
gaggtgggggagaaggagaagagcagggccgaggtgggggagaaggagaagagcagggcc
gaggtgggggagaaggagaagagcaggaagagagagcgcagccatgagaggggggacggc
gagcagcgctcacacaaacgcagccgcagcaaagagcggagccaccggccacgagagccc
agcaatgggaaagcccatgggaaacacagagagcgcaggagaagccagagcatggatcga
ggagagagaacgacacagagagcgcaggaggagccagagcatggatag
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