Oncorhynchus keta (chum salmon): 118372733
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Entry
118372733 CDS
T09424
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118372733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118372733
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118372733
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118372733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_4
zf-RING_10
Prok-RING_4
zf-rbx1
zf-RING_6
zf-C3HC4_4
zf-RING_11
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
118372733
NCBI-ProteinID:
XP_052340779
LinkDB
All DBs
Position
28:12589044..12618343
Genome browser
AA seq
415 aa
AA seq
DB search
MGSQVLPSPSGRPPLPSTFPVGGGIQGWLPVSSDEMSVRGGQGSDEVLVSQAVWDYLAAA
GQPWLIDFQDKQGLSAGIIRRGERGGCCAVRLRPVEGSPSGGRPGMIEEGPISNETRKAF
IDLCRCARKEMSKQDGGPKRKRSLLPCVGLGVLEGDGEGSLLPPQPPQPRRSQRQQQRYK
KPAEEEACVVLSNSTSHNEFGQRKKDNMEVSCSMMASSHNQSHSEADDYTSCSICMGDMV
ERTTLERCGHAFCRLCLDQAFKVKRACPVCRQVYGQLIGNQPATGCMMVERDPDLELPGH
AGYGCICIIYSFPPGLQAPEHPNPGVRYPGTDRVAYLPDSPEGNRVLGLLRRAFEQRLIF
TIGTSMTTGMHNVITWNDIHHKTSLWGGPHCFGYPDPTYLVRVTEELREKGIAAD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgcaagttcttccttcaccttcaggtagacctcctctcccaagtacttttcct
gtaggtggtggtatccagggatggctaccagtttcatcggatgagatgagtgtgcgcggg
gggcagggtagtgacgaggtgctggtgtcccaggcggtgtgggactacctggctgccgct
ggccagccctggctcatagactttcaggacaagcagggcttgagcgccggcatcatccgc
cgaggtgagcggggaggctgctgtgcagtgcggctacgccccgtagagggatccccttct
gggggacgacccgggatgattgaggaaggacccatctccaacgagacccgcaaggccttc
atagacttatgccgctgcgcccgcaaagagatgagcaaacaggatgggggtcctaaacgg
aagaggtccctgctgccctgcgttgggttgggggtcctggagggggatggagaggggagc
ctgctaccacctcagcctccccagcccagacgctctcagaggcagcaacagagatataag
aagccagcggaggaagaggcctgtgtggtcctctccaactccacgtcccacaacgaattc
ggacagaggaagaaggacaacatggaggtcagctgcagtatgatggcctcctctcataac
caatcccacagtgaggcagacgactacacctcatgttccatctgcatgggtgacatggtg
gagaggaccacgctggagaggtgcggccacgcattctgccggttgtgtctagaccaggcc
ttcaaggtgaagagagcgtgtcctgtgtgtcgtcaggtgtacggccagctcatagggaac
cagccggctaccgggtgtatgatggtggagagggacccagatctggagttgccaggacac
gcgggttatgggtgtatctgcatcatctacagcttcccccctggtttacaggcgccagag
caccctaacccgggggtgaggtaccctgggacggaccgcgtggcttacctcccagacagc
ccagaggggaaccgggtcctgggcctgctccgccgggccttcgaacagcgcctcatcttc
accatagggacctccatgaccacaggaatgcataatgtcatcacctggaacgacatccac
cacaagacctccttatggggcggaccacactgctttggatacccagaccccacttacctg
gtgagagtgaccgaggaactccgagagaaaggcatcgctgcagactga
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