Oncorhynchus keta (chum salmon): 118372792
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Entry
118372792 CDS
T09424
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118372792
Membrane trafficking [BR:
oke04131
]
Protein recycling
Others
EARP complex
118372792
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DUF1059
Motif
Other DBs
NCBI-GeneID:
118372792
NCBI-ProteinID:
XP_052325922
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All DBs
Position
19:complement(19507564..19767965)
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AA seq
975 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESIADLSPVEDFRIPSKEEMREMREQPIDPQAEQEIINSIQEV
YYSNDSFDMVQHELEKLPPELNLQELEEYRDQLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLSISKEDFTEASLGLLANQRRRHLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTRVQLAYTLLEKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITQDSYVPCLSDLCKALWEVMLSYHRTMQWHEEQDKEEPPPTTDE
AVAADTEEAVVDHSYVKKKLEHGLTRIWQEVQLKVKAYLLGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQSRSPSVSPSRQVLSSQDQVLSSKDQEVLSLFQHFSQEGNPFERHIDNKD
EETEDVLASNGYESDELEKCVYQDYDSDSDVPDELKQDYVDEQTGDVPLKSASRETLRSR
KKSDYSLNKGSNAPILTNTTLNVIRLVGKYIQMMNILKPIAFDVIHCVSQLFDYYLYAVY
TFFGRNDMYESSGPGLISSRLRTTLNRIQESLIQMDSLGEGSSIVHGGPGEDRKEKVPSP
HLSQLVVLTASETLYGLAQRVVATESLVFLAEQFEFLQSHLDTMMPAAKKPFLQQFYSQT
VSTASELRKPIYWVVAAKALDYEQMLLLMAGVKWDIREIMSQHNVYVDVLLKEFEEFNKR
LGDVSRHVRVPLPVSNVLWEHCIRLANRTLVEGYGNVKKCSNEGRALMQLDFQQFLMKLE
KLTDMRPIPDKDFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKAR
QKLLAAIDDIDRPKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagataaagtcacttatggcccggcagggcctgaaaagcccacaggagagcatt
gcagacctcagcccagtggaggacttcaggatcccaagcaaggaggagatgagggagatg
agggagcagcccattgacccccaggcggagcaggagatcattaacagcatccaggaggtc
tactactccaacgactcctttgacatggtgcagcacgagctggagaaactcccacctgag
ttgaacttgcaggagctggaggagtacagagaccagctgaagagacaacaagcagcggtt
tccaaaaaagttgccgatcttatcctggaaaaacagccgtcctacgttaaggagttggag
agggtgacgtcattacaaaccaatctacagctggctgcagtgatttgcaccaatgctagg
aggcagctgagtatttcaaaggaggacttcaccgaggccagcctggggctcctagccaat
cagaggaggagacacctgctcacagggctgctgaagtcactgaggaccatcaagaccctg
caaaggactgatgttcgactcagtgagatgctggaggaggaggactatcctggtgccatc
cagttgtgtctggaatgtcagaaggctgccagcacattcaaacactacagctgcataagt
gagttgaattccaagctacaagacactctggagcaaatagaggagcagctggatgtggcc
ttgtctaaaacctgcaagcactttgatgtctcccactacaccagagttcagctggcgtac
accctcctggaaaagacccagacggccatggaccagctccacatgcacttcacccaggcc
atccacaacactgtgttccaggtggttctgggatacgtggagctctgtgccggcaacgcc
gacaccaagtttcagaagatgcagtacaaggacctctgcacgcacatcactcaagacagc
tacgtcccctgcctgagcgacctgtgcaaggcattgtgggaggtgatgctcagctaccac
cggaccatgcagtggcatgaggagcaagacaaggaggagcccccacccaccacagatgaa
gcggttgctgcagacaccgaggaggcggttgttgaccacagctatgtaaagaagaaactg
gagcatggactcactcgaatctggcaggaagtccagctaaaagtgaaagcctatctgctt
ggtacagacatgtctaacttcaaatatgacgacttcatcgtggtcttggatgttatcagc
aggctgatgcaagtgggggaggagttctgcggcagtaagtcagagttgctgcaggaatcc
atcaaacgtcagagcgtaaactacttcaagaactaccacaggacacgcctggaggagttg
cggatgtttctggaaaatgagacgtgggaactgtgtcctgtcaagtccaacttcaacatc
gctcagctccatgagtttaagttcatgggtcagagccggtccccttcagtgtctcccagt
agacaggtgttgtccagtcaggaccaggtgttgtccagcaaggaccaggaagtcctgtct
ctgtttcagcacttcagtcaggaggggaacccctttgagaggcacatcgacaacaaagat
gaggagactgaggacgtactggcctccaacgggtatgagtccgatgagctggagaagtgt
gtgtaccaggactatgacagcgacagcgacgtccctgatgaactcaagcaggactacgtg
gacgagcagaccggagacgtccctctcaagagtgcgtcaagggagaccctgcgcagcagg
aagaagtccgactacagcctaaacaaaggctccaacgctcccatcctgaccaacacaacc
ctcaacgtgatccgactggtcgggaagtacatacagatgatgaacattctgaaaccaata
gcctttgacgtcatccactgtgtttcccagctgtttgattactacctgtatgctgtctac
accttcttcggccgcaatgatatgtatgaatcatcaggtccgggtctgatcagcagccga
ctgagaacaacactgaacagaatccaggagagcctcatccaaatggattctctgggggaa
ggcagctccatcgtgcacggtggtccgggggaggacagaaaggagaaggtgcccagcccc
cacctcagccaacttgtggtcctgacagccagcgagaccctctacggcctggcccagagg
gtggtcgccacagagtcactggtgtttctggccgagcagtttgagttccttcagtctcac
ctagacaccatgatgcctgcagccaagaagccgttcctccagcagttctactcacagact
gtctccacggccagtgagctacgtaaacccatatactgggtggtggcggccaaggcttta
gactacgaacagatgctgctgctgatggctggagttaagtgggacattagggagataatg
tcgcagcacaacgtgtacgttgatgtcctgttaaaggagtttgaagagtttaacaagagg
ctgggtgatgtgtccagacacgtccgggtccctctgcctgtgtctaatgtcctgtgggaa
cactgcatccgtctggccaacaggacgctggtggaaggctatggtaacgtgaagaagtgc
agtaatgaagggcgggccctgatgcagctggacttccagcagttcctgatgaagcttgaa
aagctgacggacatgaggcccatccctgacaaggactttgtggagacctacatcaaagcc
tactacctgactgagaatgacatggagcagttcatcaagaaccacagggagtactccatg
aagcagctggccaacctggtgaacgtgtgtctgggctctcacatcaacaagaaggcccgg
cagaaactcctggcggctatcgacgacatcgacagaccaaagagatag
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