Oncorhynchus keta (chum salmon): 118372829
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Entry
118372829 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118372829
04120 Ubiquitin mediated proteolysis
118372829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118372829
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118372829
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118372829
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf_RING_Vps8_fungal
FAR1_N
zf-RING_Vps41
FANCL_C
Motif
Other DBs
NCBI-GeneID:
118372829
NCBI-ProteinID:
XP_052343366
LinkDB
All DBs
Position
30:complement(9287214..9299404)
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AA seq
620 aa
AA seq
DB search
MVRAALVTATSLALTGAVIAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMLLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVFTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFLTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVA
GAKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPVNAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAAGAPGATETPGATEAAQTQGAGTT
GASTVGAAPAPGGPMPGFPFHSFPPPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEA
ELRELEQQGRRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLIPPQSETSSAASGSSP
PSTSAETQENQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQGDGEEIGEDGEPNP
SELRRRRLRKLETTPPPPDH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagcgctggtaactgccaccagtctggctctgactggcgctgtgattgcc
catgcctacttgctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaagtcttcttcgggcagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttaccgtgttcagggatgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctgatgttgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccagctggtctttggatttgagtatgccatc
ctgatgacaatggtgttcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcctgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggctatgaggcagttcaagaaagctgttacg
gatgcaataatgtcacggcgagcaatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagagatggtggct
ggagccaagaaacttccctgcaaccatatcttccacgcaagttgccttcgctcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaacccaaac
cagcctcccgccccagcgcctgcccagcctcctgccccggcagcacctgtcaacgcccct
gttcctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctgggggcccttccctggagcggccccccctgctggtgctgctggcgcccca
ggggccacagagaccccaggggccacagaggcagctcagactcagggagctggcaccact
ggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctgggttccccttc
cactccttcccacccccaccgttcccctcagctccgtggctgactatgccaccaccacct
ccaccgtttgtgtcctccatgccccctcctcccccggccctgtccaccatgtcagaggct
gagctgagggagctggagcagcagggccgtagaggcctggaggccagactgcagtgtctc
cacaacatccacactctactggatgctgccatgctcaacatcgaccaatacctcactacc
gtcgccacactcattcctcctcagtcagaaaccagcagcgcagccagcggatcatctcct
ccctccactagtgcagaaacccaggagaaccaggagaacgactctcagagcagtacagcc
gctgaacctgaagctgtgaatggggccacaggtttctcccagccagactctaccacgttg
ggcgacagtgaagaccagggggatggagaggaaatcggggaagacggagagcccaaccct
tcagagctgaggcgccgtcgtctccgcaaactcgagaccacaccccctcctcctgaccac
taa
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