Oncorhynchus keta (chum salmon): 118372833
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Entry
118372833 CDS
T09424
Name
(RefSeq) transcriptional activator GLI3-like
KO
K06230
zinc finger protein GLI3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118372833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118372833
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118372833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
118372833
NCBI-ProteinID:
XP_052361208
LinkDB
All DBs
Position
4:complement(29364659..29503203)
Genome browser
AA seq
1655 aa
AA seq
DB search
METQSQASSAAEKKKRVETIVATKGSSARADISEKAVASSTTSNEDESSGTPYHHHHHHH
RERRNAISTQAPTPGPPGSKLGEEPSTSTEERPPLVKKELHSSLPHLVDHGLPYRGTLFA
MDPRNGYLDSHYAPPQFFPAFHPPVPIDDRHAQGRYIYEPSPVPPLHVPPSLAGSPAFSD
ISLIRISPHRNPSVGAESPFNPPHPYINPYMDYIRSLHSSPSLSMISAARGLSPADVPHT
GLTTAEYYHQMALLAGHRSPYTDLLPSVASTAGATSSALHMEYLQAVESSRFPSPRLTAR
PSRKRALPISPLSEHSFDLQTMIRSSPNSLVTILNNSRSSSSTNGSYGHLSAGAISPALS
FAYPPTPVALQMHQQLLGRQPGIVGSAFGHSPPLIHPSPAFATQRPVPGIPPPGLTPSER
SVISNDSSQTKPTSESAVSSTGDPMHHKRSKIKPDEELLSPGAVCCQDHPDGMTLVKEEG
DKDDSKQEPEVVYETNCHWESCHREFDTQEQLVHHINNDHIHGEKKEFVCHWDECSREQK
PFKAQYMLVVHMRRHTGEKPHRCTFEGCPKAYSRLENLKTHLRSHTGEKPYVCEHEGCNK
AFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRSD
AFPRPPPQSREGGNGQGRSPGQLGGYADQREYNHATSKQDECLQVKSIKTEKPMTSQPSP
GGQSTCSSDQSPISAYPSHGVQLAVRGGVVGLGEGPGEEDEELEEEEGLEELEGGRDAPI
MDSTVSTATAATLALQARRNVGRPMRWMEHMKMERLKQVNGGGGALMPRVGPLSPTPPPK
GPAVLGSCLGRLSQPPPRPELGSTELTVLSLLRGIEHGDRRDSSGSATSSAYLSSSRRSS
GISPCFSSRRSSQASQSEAANTPGHHRRHHNLSSTDSYDPISTDASRRSSEASQCGGGGG
VFVGGGWAGVGGGSKGMLNLTPAQHYHLKAKYAAATGGPPPTPLPNMERMSLKTRMAMMG
DGQDGCGGNHALPPLVRPRRCSDGSTTNGYGGHGGYRDYRRRGYYPGEGPGNGPDRRASD
PVRTQPQQTHPEFLGLPQVQRFSSLNNIHPLPPLAGLQHPTAEGRSFSLQNYTRSEGNLQ
RGGLLSSPCPPSIMEHAALEALAMEEEGALLLEDEDMLPDDLVQYLRSQDQADSYSNHLE
NHVAGDNGHLPGGELQDQGPGLNQCIHSLQQRHQQQQGLEREGPSKDGMPIQWNEVSSGS
AERSPQRQPQVQVQAQQRCGRWAATEQHQGLGAGSSFGRFGNMVVQQQQQTVTTRDFQNR
CAQPGQPQPLCRVTGGVKLEATTHSCMEMRGNGHNPTHTFGRPDFSQISVGPLPQGYSQQ
QYQTQNHGTSRQIGDNLLLSRASVDSLSQAPALHHHPQAPAPRLQQANSSYRHPARPQQY
LNAQQSTTNGCHVNLTQQNLTQQQQSLRNQASHCSLAHQVSGLKLEAPDQGYLDQSFSDQ
AVCFDPLETKTSSFSPMEEQCLLETMNEQVGLGGDSSVAASLLSPVADQVTSTVDSRAGG
LVNVLDNVLPLDFGAMIEDVRVGYDQGSLVSGVISPSIFQGMSRNSSRLTTPRVSATFHS
TAGMMPSNLSNMAIGDMSSLLTTLAEESKFLAIMQ
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagtcccaggccagttctgcagctgagaagaagaagagggtggagaccatc
gtggcgaccaagggctcgtcggcgcgcgccgacatcagcgagaaggctgtggcctctagc
actacgtcaaacgaggatgagagctcgggcacgccataccaccaccaccaccaccaccac
cgtgagaggcgcaatgccatcagcacccaggcccccacacccgggccccctggcagcaag
ctgggtgaagagccctccacctccacagaagagcgcccaccgttggtaaagaaagagttg
cacagctcgctgccccacctggtcgaccacggcctcccgtaccgcggcacgctgttcgcc
atggaccctcgcaacggatacctggactcccactacgccccgccacagttctttcctgcc
ttccatccgccggtgcccatcgatgacagacacgcccagggacgctacatctacgagccg
tcccctgttcccccgctgcacgtgcctccttcgctggccggcagcccggcgttctccgac
atctccctcatccggatctccccccaccggaacccctccgtgggggccgagtcaccgttt
aaccctccgcacccgtacatcaacccctacatggactacatccgctcgctccactccagc
ccctccctctctatgatctctgcagccaggggcctcagccccgcggacgtccctcacaca
ggcctgaccactgcagagtactaccaccagatggctctcctggcgggccaccgtagcccc
tacacggacctcctcccctccgtggcctccacagccggagccaccagcagtgccctgcac
atggaatatctgcaggccgtggagagctctcggttccccagccccagactgacagcgagg
cccagtcggaagcgggccctgcccatctctcccctgtcggagcacagcttcgacctgcag
accatgatccgcagctcgccaaactccctggtcaccatcctcaacaactcccgctccagc
tcctccaccaatggctcttacggacacctctctgccggggccatcagtccggctttgagt
ttcgcttaccctcccaccccagtggcacttcagatgcaccagcagctgcttggtcggcaa
ccagggattgtgggttctgcattcggccacagtccgcccctcatccacccctccccggcc
ttcgccacccagcgtccagtcccaggcatccctccccctggcctgacccccagcgaacgc
tccgtcatctccaatgactcctctcagaccaaacccactagcgagtcagcggtgagcagc
actggggaccccatgcaccacaaacgctccaagatcaaaccggacgaggagctactcagc
ccaggggccgtatgttgccaggaccatcctgatgggatgactcttgtgaaggaggaaggg
gacaaggacgacagcaagcaggagccagaggtggtgtacgagaccaactgccactgggag
agctgccaccgggagtttgacacccaggagcagctagtacatcacatcaacaacgaccac
atccacggggagaagaaggagtttgtgtgtcactgggatgaatgttctcgggaacagaag
ccctttaaggcccagtacatgctggtggtccacatgaggagacacaccggggagaaacca
cacagatgcacctttgagggatgtcccaaggcctactctcgcctggagaacctgaagacc
catttgcgctcccacactggagagaagccgtacgtctgtgaacacgagggctgcaacaag
gccttctccaacgcctccgacagagccaagcaccagaaccgcacacactccaacgagaaa
ccctacgtgtgtaagatccctggctgcaccaaacgctacacggaccccagctccctacgc
aagcacgtaaagaccgtgcacgggccagaggcgcacgtgaccaagaagcagcgcagcgac
gccttcccacgtcccccgccgcagtcccgagaggggggcaacgggcagggccggtcgccg
gggcaactagggggatacgcagaccaaagggagtacaaccacgctacctcgaaacaggac
gaatgtctgcaggtcaagtccatcaagacggagaagcctatgacgtctcagccaagccct
ggcggtcagtctacatgcagcagtgaccagtcccccatcagcgcctatcccagccatgga
gtccagcttgctgtgaggggaggggtggtgggactgggcgaggggccgggagaggaagat
gaggagctggaggaggaggagggtttggaggagttggaggggggccgtgacgcccccata
atggactccacggtgtcgacagccacggcggctacgttggcgctgcaggcgaggaggaac
gtgggccggcccatgagatggatggagcacatgaagatggagaggctgaagcaggtgaat
ggaggaggaggagcccttatgcccagggtgggccccctgtcccccacaccgccacccaag
ggacctgccgtgctgggttcatgcctgggcaggttatcccagcctcctcctcgtcccgag
ctgggtagcacagagctgacggtgctcagcctgctccgcggcatcgagcacggtgaccgg
cgggacagcagtggcagcgccaccagctcggcctacctgagcagcagccggcgctcctcg
ggcatctctccgtgcttctcgtcacggcgctccagccaggcgtcccagagcgaggcggcc
aacacccctggtcaccaccgccgccaccacaaccttagctccaccgactcctatgacccc
atctccactgatgcctcacgccgttccagcgaggccagccagtgcgggggaggaggtgga
gtgtttgtgggtggagggtgggcgggcgtcgggggaggctccaagggtatgctcaacctc
acgccggcgcagcactaccacctaaaggccaagtacgctgctgccacgggcggcccaccc
cccacgccgctgcccaacatggagcgcatgagcctgaagacccgcatggccatgatgggc
gatggccaagatggatgtggaggcaaccacgcgctgcccccactggtcaggccgcgccgc
tgcagcgacggcagcaccaccaatgggtacgggggccacggcgggtaccgagactaccgg
cgtaggggctattaccccggcgagggcccggggaatggcccagaccgaagggctagtgac
cccgtgcggacccagcctcagcaaacccacccggagttcctcgggctgccccaggtccag
cgcttcagcagccttaacaacatccacccacttccccctctagcaggcctccagcatccc
acggcagagggccgcagcttcagcctgcagaactacacacgctcagaggggaatctccag
agagggggcctgctttcctctccctgcccccccagtatcatggagcatgcggccctggag
gccctggctatggaggaggagggagccctgctgctggaggatgaggacatgctgcctgac
gacctggtgcagtacctccgctcacaggaccaggcagactcctacagcaaccacctggag
aaccatgtggctggggacaacggccatctccctggaggggagttacaggaccagggccca
gggctgaaccagtgcatccacagtctccagcagcgccaccaacagcagcagggactggag
agagagggccccagtaaagacggcatgcccattcagtggaacgaggtcagctcagggagt
gctgagaggtccccccagaggcagccccaggtccaggtccaggcccagcagaggtgtggc
cgatgggccgccacagagcagcaccaaggtctgggtgccggttcatcattcgggaggttt
gggaacatggtggtgcagcagcaacaacagacagttactaccagagacttccagaaccgc
tgtgcccagccaggccagccccaacccctatgcagagtcactggcggggtgaagctagag
gcgaccacccactcctgcatggagatgagagggaacggccacaaccccacgcacactttc
ggccggcctgacttctcccagatctctgtggggcctctgccccagggctacagccagcag
cagtaccagacccagaaccatggaacctccaggcagattggagacaacctgctcctcagc
cgggcctccgtggacagcctctcacaggccccagcgctccaccaccacccccaggccccc
gccccccgcctgcagcaggccaacagcagctataggcaccccgccagaccacagcagtac
ctgaatgcccaacagagcaccaccaacggttgccatgtcaaccttacccagcagaacctc
acccagcagcagcagagtctgaggaaccaagccagtcactgctccctggcccaccaggtg
tccgggctgaagctggaggctcctgaccagggctatctggaccagagcttcagcgaccag
gctgtgtgctttgacccgctggagaccaagacctcgtctttctctccaatggaggagcag
tgtctgctggagaccatgaacgagcaggtggggctaggcggggactcctcggtcgcggcc
tccctcctctccccggtggctgaccaggtgacaagcacggtggacagccgcgcgggcggc
ttggtcaacgtgctagacaacgtgttgccgctggatttcggagccatgatagaggacgtg
agggtgggctatgaccagggtagtctggtgtcgggggtgatcagcccctccatcttccag
ggcatgtcccggaactcgtcccgcctcaccacgccccgggtctccgccaccttccacagc
accgcgggcatgatgccctccaacctcagtaacatggccatcggggacatgagctccctg
ctcaccaccctcgccgaggagagcaagttcctagccatcatgcagtaa
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