Oncorhynchus keta (chum salmon): 118372907 Help Entry 118372907         CDS       T09424                                  Name (RefSeq) THO complex subunit 3-like   KO K12880   THO complex subunit 3 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke03013   Nucleocytoplasmic transport oke03040   Spliceosome Brite KEGG Orthology (KO) [BR:oke00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     118372907   09122 Translation    03013 Nucleocytoplasmic transport     118372907  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oke03019]     118372907    03041 Spliceosome [BR:oke03041]     118372907 Messenger RNA biogenesis [BR:oke03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      118372907 Spliceosome [BR:oke03041]  Complex C   Other components    EJC/TREX     118372907  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     118372907 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_Vps41 Beta-prop_EML Beta-prop_TEP1_C eIF2A NBCH_WD40 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Tricorn_2nd TRM82_WD WD40_MABP1-WDR62_1st RMC1_N Beta-prop_SPT8 WDR90_beta-prop_4th PD40 PAC11 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 B-prop_COPA_B_2nd Beta-prop_WDR75_1st Peptidase_S9_N Beta-prop_SCAP Beta-prop_Nup120_160 WD_LRWD1 Beta-prop_WDR11_1st Beta-prop_ELP1_1st Beta-prop_NWD2_C Motif Other DBs NCBI-GeneID:  118372907 NCBI-ProteinID:  XP_052373081 LinkDB All DBs Position 4:complement(79269726..79274834) Genome browser AA seq 329 aa AA seqDB search MASRYYQETQDSFRNNNKSREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDCL VKENNYRGHGDSVDQLCWHPTNPDVFVTASGDKTIRIWDVRTTKCTATVNTKGENINICW SPGGQTIAVGNKDDVVTFIDVKSHRSRAEEQFKFEVNEISWNNDNNMFFLTNGNGCINIL SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWTVEELVCVRCFSRLDWPV RTLSFSHDGKIRRSPSGMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLL AYACDDKEGKYDNNREAGTVKLFGLPNDS NT seq 990 nt NT seq  +upstreamnt  +downstreamnt atggcgtccagatattatcaagagacgcaagatagtttcagaaataacaacaaaagcagg gaattccctgcgcatagcgctaaagttcattcagtagcatggagttgcgacggcaggagg ttggcatctggatcttttgataaaacagcaagcgtatttgtcttggaaaaagactgtttg gtgaaagagaacaactacagaggccatggagacagtgttgatcagctgtgttggcatcct accaacccagacgtgtttgtcactgcatcaggggacaagaccatacgcatttgggacgtc agaacaactaagtgcacggctactgtcaacactaaaggggaaaacatcaacatctgctgg agtcccggcggccaaacgatagccgttgggaacaaggatgatgtggttaccttcatcgac gtcaaatcacaccggtcacgagctgaggagcagtttaagtttgaagtcaacgagatctcg tggaataatgacaacaacatgttctttctcaccaatggaaacgggtgcatcaacatcttg agttaccccgagctgaagcccatccagtcgatcaacgcccatccctccaactgcatctgc atcaagtttgaccccacggggaagtactttgccacaggaagtgcagatgccctggtcagt ctgtggaccgttgaagaactggtctgtgttcgctgtttttccaggttggactggccagtg agaacattgagtttcagccatgatgggaagatcagacgcagcccgtctggtatgctggca tcagcctccgaggaccacttcatagacatagcagaggttgaaacaggagagaagctgtgg gaggtccagtgtgagtctcctacgttcacagtagcctggcatcctaagagaccgctgctg gcctacgcatgtgatgacaaggaagggaagtacgacaacaatagagaggcaggcactgtc aaactgtttggattacctaatgattcctga

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