KEGG   Oncorhynchus keta (chum salmon): 118372910
Entry
118372910         CDS       T09424                                 
Symbol
rbm20
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 20
  KO
K24052  RNA-binding protein 20
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118372910 (rbm20)
Spliceosome [BR:oke03041]
 Complex A
  Other components
   Complex A specific factors
    118372910 (rbm20)
SSDB
Motif
Pfam: zf-met zf-C2H2_jaz HR1 RRM_1 Ndc1_Nup zf-U1
Other DBs
NCBI-GeneID: 118372910
NCBI-ProteinID: XP_052356811
LinkDB
Position
Unknown
AA seq 1296 aa
MQQAWDKALFEAHIEGVKNGQTGEMSGKSQGGYMGTKTSNEHFQSTSVSDGNDNKPQPVG
GVQGQLSGGGGTHQNHQNTQLLLTPASIQLAQLQAQLTFHRLKLAQSAVGGNANSANAAS
ILNQVLANVAMSQPLFNQLRASAMVSNPQAVGGGFHSSALAFQLPPPPPPPPPPPPPPNS
ALGTLVGAGFNQNHGNLRLNHYGGGGVSGNQQQQQQANQHGGSDYGKKAGSTYPSDMDRR
LQYGFTGGTSVALSEPGEGQGQYVPIMTQAKSTNQGFQIDFYGQSQQQQAGFSVGNQNYQ
NKNTFNEQQWKSPGNMSHAGKGLDMVSNTATVWRGTGQPVRAREDLYNPEEPTSDPKLNS
GGGEITSSFGEGMGGTKGFVGYHKQPLQGGEETLSTGGSVQLQPHQLNDFHAVTPSHLPH
QCTICEKKVYNLKDWDQHVKGKLHLQNRLLYSEGATITAGAVYYGPAGSSEGCLNNGGVN
NSMAYSSTANQDVSSGANLPAGVMRTYPMSGAGFTQLPPGSKVFPPRKSITGRVVHICNL
PEGSCTENDVINLGLPFGKVTNYILMRSTHQAFVEMAYIEAAQAMVQYYQLTPATINDQK
LLIRMSKRYKELQLKKPGKDVDSIIQDINSLRERDEMQETDHYMPERARSRSPISRSLSP
RSHSPSFTSCSSAHSPQGAPCRGGPERGSWTAKHMRKGDEDREQERERDEVPWRNGGTVD
DDRLNGRMQDRRNKPYLKPSERISPRSADQRGGGRGEGMRGGDWYPHPRCSPQGMPPFSS
YRNTDEDSYKTQHVYRPEKPLRPQYQRHEEGRVKSKRRDGGDYHRSRHSESELGEESLPT
RTGEDRRQRGGSPTWRRSKKPTMRHQEKPEIEMTENNGQPAEDQRSKEKSVSPQRSGKHE
REKDSEAEEWESGDDTEGECWYPKNMEELVTVDEVGEDDSIIEPDLPELQDDEDVSASDL
QKDPTEEEEGEAPRSTSTPSPRPCSEKELAQREDTELGRGGGVGGVVDPIPTEQKDGEIS
TNPSPTDQSLPQSQPQPQPQSQPQPQSQSQPHQPQPQPQPQPQSQSQPQPQPQPQPQPQP
QPQPQPQPQPQSQPQPQPQPQPQSQPQPPIPVASEQLSSDLDDFPNPEFKAALEETCLEV
EVLKSGAPTQELALTNHAGACESSKTQDVIHQMEDVGREVTVMKPDIQQHKAETPRVIQN
STHVPRPINLIDIGAPSPSRGQEKIISEHSIPLGVEFIVPSTGFYCKLCGLFYTSEETAK
TSHCRSTVHYRNLQKYLSQLAEESLLGALTDPSATE
NT seq 3891 nt   +upstreamnt  +downstreamnt
atgcaacaggcctgggataaggctctctttgaggctcacatcgaaggtgtcaagaacggc
caaactggtgaaatgtcggggaaaagccaaggaggatatatgggaaccaagacgtccaac
gaacacttccagagcaccagcgtgtccgacggcaatgataacaagccccagccagtgggt
ggtgtccagggccagctgagtggtgggggtgggacccaccagaaccaccagaacacacag
ctcctcttgacacccgccagtatccagctagcccagctccaggcccagctcaccttccac
cgccttaaactggcccagagtgctgtggggggcaacgcaaactctgcaaacgcagccagc
atcctcaatcaggtccttgccaatgtggccatgtcccagcccctcttcaaccagctccgc
gcctcggccatggtcagtaatccccaagcagttggtggtggtttccactccagtgcccta
gccttccaactgcctccaccaccgccgccaccgccgccaccgccgccaccccccaactct
gccctggggactttagtaggggccggattcaaccagaatcatggtaatctgaggctgaac
cattacggaggtgggggtgtttctgggaaccaacagcagcagcaacaggccaaccagcat
ggtggatcagactacggcaagaaagctggctcaacatacccttcagatatggataggcgt
ctccagtatggcttcacaggggggacgtcggtggcgttgagtgaacccggagagggacaa
ggacagtacgtgccaatcatgactcaggcaaagagtacaaaccaaggctttcagattgac
ttctatggtcagagtcaacaacaacaggctgggttcagtgttgggaatcaaaactatcag
aacaagaacacttttaatgagcagcagtggaaaagcccaggtaacatgagccacgcggga
aaagggttggacatggtttccaatactgccacagtatggagggggactgggcagccagtc
cgtgccagagaggatctgtacaatccagaggagccaacctctgaccccaagttaaattcc
ggcggtggggaaattacttcctcgttcggagaaggcatgggtggcaccaaggggtttgtg
ggataccacaagcagcccctgcaggggggagaggagaccctgtctacaggtggttccgta
caactccaacctcaccagctgaatgacttccacgccgtgacgccatcccacctgccccac
cagtgcaccatctgtgagaagaaggtctataacctcaaggactgggaccagcacgtgaaa
ggtaaactacacctgcagaaccgcttgctgtactctgaaggcgctacaatcacagccgga
gccgtctactacggtcccgccgggtcgtctgaaggatgcctaaacaacggcggagtgaat
aactccatggcttactcttccactgccaatcaagatgtatcatccggagctaacctacca
gctggagtaatgagaacctatcccatgtcaggggctggatttacccaactcccacctggg
tcaaaggtatttccacccaggaaatcaatcacaggacgggtggtccacatctgcaacctc
cccgagggcagctgcacagagaatgatgtcatcaacctgggactgcccttcgggaaagtc
accaactacatcctcatgcgctctacccaccaggcgtttgtggagatggcgtacattgag
gcggcccaggctatggttcaatactaccagctgactccagccacgatcaacgatcagaaa
ctactgatcaggatgtccaagagatacaaggagcttcagctcaagaaaccagggaaagac
gttgattcaatcatccaggatatcaactctctgagggaaagggacgagatgcaggagact
gatcactacatgccagagagagcgcggtcccgtagtcccatcagccgctctctgagccct
cgctcccacagccccagctttacctcctgtagttcagcccacagcccgcagggggcaccc
tgccgaggaggcccggaacggggctcctggaccgccaaacacatgagaaagggggacgag
gacagagaacaagagagggaaagggacgaggtgccatggaggaacggaggtacagtggat
gacgacaggctgaacgggaggatgcaggatcgtcggaacaagccgtacctgaaaccctcc
gagcggatcagtcccagatcagcggaccaaagaggaggaggaagaggggaggggatgagg
gggggggactggtacccccacccgcggtgtagccctcaggggatgccccccttctcttcg
tacaggaacacggatgaggactcctacaaaacacagcacgtgtataggccagagaagccc
ctgaggccacagtaccagagacatgaggaggggagagtcaagtcaaagaggagggatgga
ggggactaccacagatccagacactcagagtcagagctgggagaggagtctctacccacc
aggacaggagaagacagaagacagagaggaggctccccgacatggagaaggagcaagaaa
cccaccatgagacaccaggagaaaccggaaatagagatgactgaaaataacggacaaccc
gctgaggatcagcgatccaaagagaagtctgtttctcctcaacgaagtggcaagcatgag
agagaaaaagacagcgaggcggaggagtgggagagtggggacgacacagagggtgagtgc
tggtaccccaagaacatggaggagctggtcacagtggacgaggtaggagaggacgactcc
atcatcgaaccggacctccctgagctgcaggatgacgaggatgtgtcagcctcagacctc
caaaaggatcctacggaggaggaggagggagaggctccacgatcaacctccactcccagt
cccaggccctgctctgagaaggagttagcccagagagaggataccgagttgggtagagga
ggtggggtaggtggggtggtggatcctatacctacagagcagaaagatggggagattagc
acaaaccccagccccacagaccagtcactgccacagtcacagccacagccacagccacag
tcacagccacagccacagtcacagtcacagccacaccagccacagccacagccacagcca
cagccacagtcacagtcacagccacagccacagccacagccacagccacagccacagcca
cagccacagccacagccacagccacagccacagtcacagccacagccacagccacagcca
cagccacagtcacagccacagccacccatcccagtagcctcagaacagctcagttcagat
ctggatgatttccccaacccggagttcaaggcagccctggaagagacgtgtttggaagtt
gaagtactgaagagtggagcgccgacgcaggagctggcgctaaccaatcacgctggcgcg
tgtgaaagcagcaagacccaggatgtaatacaccagatggaggacgtggggagggaagta
acggtcatgaagccagacatacagcagcacaaggctgagactcctagagtcatccagaat
tcaacacatgtcccacgtcctataaacctgatagacataggggctccctcaccttctaga
gggcaggagaagattatcagtgaacacagcatccctctgggggtggagttcatcgtgcct
agtacggggttctactgtaagctgtgtggcctgttctacaccagcgaggagacagccaag
acctctcactgtcgtagtactgtccactacaggaaccttcagaagtacctgtctcagctg
gcagaggagagtctacttggtgcactaactgacccctcagctacagagtga

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