Oncorhynchus keta (chum salmon): 118372921
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Entry
118372921 CDS
T09424
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118372921
04082 Neuroactive ligand signaling
118372921
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118372921
Ion channels [BR:
oke04040
]
Ligand-gated channels
GABA-A
118372921
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF2070
Motif
Other DBs
NCBI-GeneID:
118372921
NCBI-ProteinID:
XP_035614850
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All DBs
Position
11:complement(14445583..14464690)
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AA seq
468 aa
AA seq
DB search
MEIITVDHGFVAVECLRGMAFVFNCFFLSCVSNVWGNHVKSTQTENIYLDNITRVLDRLL
DGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEI
LRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRL
MNFPMDGHACPLKFGSYAYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERL
KSNTGEYVVMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTV
LTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAA
SIKAAQEAAEAGRTDGESSSDASSMLKKRMNSTPHFERPAEVFPNPPVNAQAFLQQGSAV
PSNNLLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaattataacagttgaccacggctttgtggctgtggagtgtttacgaggcatggct
ttcgttttcaattgtttttttctgtcctgtgtgagcaatgtttggggaaatcatgtgaaa
tcaacgcaaactgagaatatctatttggataacatcacgcgtgtattggatagattacta
gatggatatgacaacagactgcgacctggatttggaggtccagttactgaggtcaaaaca
gacatctttgtcacaagctttggtccagtgtcagatgttgagatggagtacaccatggat
gtattcttccgtcagacgtggattgacgagaggttgaaattcgagggccccatcgagatt
ctgcggctcaacaacctcatggtcagcaagatctggacaccagacacattcttccggaat
ggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgcatcatgcag
aacggaactatcctctacactatgagattgacgataaatgcagagtgtcccatgagactg
atgaacttccccatggatggccatgcctgtcctctcaagtttggtagctatgcctaccct
atgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaagtcccagag
gagtcctccagcttgctacagtacgatctaataggacagacagtgtccagtgagaggtta
aaatccaacactggtgaatatgtagtcatgactgttcacttccacctgcaaaggaagatg
ggcttcttcttgattcagacatacatcccctgtatcatgactgtgatcctggctcaggtc
tctttttggatcaataaggaatcggttcctgcacgaactgtattcggcattaccacagtg
cttaccatgaccacactcagcatcagcgcccgccactctttgcccaaagtctcttacgcc
acggccatggactggttcatcgctgtgtgtttcgccttcgtcttctcagccctcattgag
tttgccgcagtcaactacttctccacgctgcaggccaaccgggagctccgcaaggcggcc
tccattaaggcagcccaggaggcagcagaggccgggaggaccgacggggagtcctcttcg
gatgccagcagtatgctgaagaagaggatgaactccacgcctcactttgagaggccagcg
gaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggctcagctgtg
ccatccaacaacttactgacaggcaccagcatcatagacaagtactctcgcatcctcttc
cctctgtcgttcggggccttcaacctggtgtactggatcgtctatctcaccaaggacacc
atggagatgacaagggacagcgtgtga
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