Oncorhynchus keta (chum salmon): 118372930
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Entry
118372930 CDS
T09424
Name
(RefSeq) cadherin-22 isoform X1
KO
K06812
cadherin 22
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118372930
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Major cadherins
118372930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
Cadherin_4
Cadherin_pro
TAS2R
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
118372930
NCBI-ProteinID:
XP_052329983
EnsemblRapid:
ENSOKEG00005034514
LinkDB
All DBs
Position
21:complement(45257384..45583379)
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AA seq
825 aa
AA seq
DB search
MAPSWRLGACSLLAALWLLHCCSCGWSERTSGMAKGETKEQELMSHERVKRGWVWNQFFV
VEEYTGTEPLYVGKIQDVLDSVKATICEMCIPPNSGPPTKNIHTDSDEGEGNIKYTISGE
GAGTIFIIDELTGDIHATERLDREEQSYYTLRAQARDRLTNHLLESESEFVIKVQDINDS
EPKFLEGPYIGSVAELSQMGTSVMKVTAWDADDPTYGSSARVVYSVLDGESFFTVDRQTG
LIRTAVADLDRETQDRYELVVMATDMAGQMGGLSGSTTVTIVITDVNDNPPRFPQKMYQF
SVSEGAAVGTPVGRVIATDTDMGENTDMSYLIKDEEGGELFKVTTDGDTQEAVITIKKPL
DFESKRTHNVVVEAVNKHVDPRFLELGSFRDQTIVRVSVTDADEPPVFLPAEGAIMEVQE
DARLGALVGTATAKDPDKENAPVRFSIDRSTDQEQIFHIDPVSGAITLGKILDRETAGWH
NITVTAVEADNVSQISHSSVSIRILDVNDNPPELARPYEASICEDVKPGQLIHTISVVDR
DEPQSGQRFSFTLAPEATNNRHFTLWDVKDNTVGIRTQRSGFNRHEQNVYLLPILVVDTG
PPALSSTGTLTIHVCGCDPEGAIQSCNATAYVISASLSPGALIALLVCMLILIVLVLLIL
TLKRHRKGQRMSEDEEDMRDNVIKYNDEGGGEQDTQAYDMSALRNLYDFPEAKSGSSESG
PDLHALPQWIQGRVSGDGGAADFSLFKGYIRKKVEQADADLSVPPYDSFQTYAFEGTSSP
ALSLSSIHTLSTTSEQDFSYLSDWGPRFRQLAGYYAPGHPEEEGS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctccctcttggagactaggagcatgtagcctgttggcggccctttggcttttgcat
tgctgtagttgtggatggtcggagaggactagtggcatggccaagggagaaactaaggag
caggagctcatgtcccatgaacgagtgaagaggggatgggtgtggaaccagttctttgtg
gtggaggagtacacaggcacagaacctctctacgttggaaagatacaagatgtcttagac
tcagttaaagccacaatctgtgagatgtgcataccaccaaacagtgggccaccaacaaaa
aacatccacacggattcggacgagggcgaggggaacatcaagtacaccatctccggggaa
ggagcgggcactatcttcatcatcgacgagctgacaggcgacatccacgccaccgagcga
ttggaccgcgaggagcagagctactacaccctcagagctcaggcccgggaccgactcacc
aaccaccttctggaatccgagtcagagttcgtcatcaaggtccaggatatcaacgacagt
gaacccaagttcctggaagggccatatattgggagtgtggcggagctttcacaaatggga
acatcagtgatgaaggtcactgcatgggatgcagatgaccctacgtacggaagcagtgcc
agggtggtgtacagtgtgctggacggagagagcttcttcaccgtggacagacagactgga
ctgattcggacggctgtggcagatctggaccgggagacgcaggatcgctatgagctggtc
gtcatggcaaccgatatggcaggccaaatgggtggtctttccggctccaccacggtgacc
atagtgatcacagatgttaatgacaacccaccacgctttccgcagaagatgtaccagttt
tcggtgtctgagggggcggccgtggggacaccggtggggagggtgatcgccacggatacg
gacatgggggagaacacggacatgagctacctgatcaaagacgaggagggcggggaactc
ttcaaggttaccactgacggagacacacaggaagccgtcatcactatcaaaaagccactg
gactttgagagcaagcgtacacacaacgtggtggtggaggctgtcaacaagcacgtggac
ccccgatttttggagcttggctctttccgcgaccagacaattgtgcgggtcagcgtaact
gacgcggacgagccacctgtcttcctccctgctgagggggcaatcatggaggtccaggag
gatgccaggctaggtgcgctggtgggcacagctacagccaaggacccagacaaggagaac
gcacctgtcaggttctccattgaccgaagtacagaccaggagcagatcttccacattgat
ccagtatcgggcgccatcaccctgggcaaaattctggaccgagagacggctggctggcac
aacatcactgtgacagcagtggaagcagataatgtatcccagatatcccattcatcagtg
agcattcgtatcctggacgtgaacgataaccctcctgaactggccagaccttacgaggcg
tccatctgtgaggacgttaagccgggtcagctcattcacaccatcagcgtggtggatagg
gacgagccgcagtcgggccaacgcttctccttcaccctggctccggaggccaccaacaac
cgccacttcaccctgtgggatgtcaaagacaacactgtagggatccggacccagcgctcg
ggcttcaaccgccacgagcagaacgtctacctgctgcctatcctggtggtggataccggg
cctcctgctctgagctccacgggcaccctgaccatccacgtgtgtggctgcgacccggag
ggcgccatccagtcctgcaatgccaccgcctacgtcattagcgcctcactcagtcccggg
gccctcatagccctactggtctgcatgctcatactcatagtcctggtgctgctaatccta
accctgaagcgccaccgcaaaggccagcggatgtcagaggacgaggaggacatgcgcgac
aacgtcatcaagtacaacgacgagggaggcggcgagcaggacacgcaggcctatgacatg
agtgccctgcgcaacctctatgacttccccgaggccaagagtggatcttctgagtcaggc
cctgatctgcatgcactgccccagtggatccaggggcgggtgagcggcgatggcggggca
gccgacttctccctcttcaagggctacatccgcaagaaggtggagcaggcggatgccgac
ctgtcggtaccgccctacgactcgttccagacgtacgcctttgaaggcaccagctcgccg
gccctctccctcagctctatccacaccctgtccactacgtccgagcaggatttctcctac
ctcagtgactgggggccacgtttcaggcagctggcgggctactacgccccgggacatcct
gaggaagagggctcctag
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