Oncorhynchus keta (chum salmon): 118372988
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Entry
118372988 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: protein scribble homolog
KO
K16175
protein scribble
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118372988
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
118372988
NCBI-ProteinID:
XP_035615042
LinkDB
All DBs
Position
4:complement(29770093..29869735)
Genome browser
AA seq
1927 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRDLPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPKLRELWLDRNQLSSLPPELGNLRRLVCLDMSENRLEELPSELS
GLLALTDLLLTQNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNADRNRLGGVPDELGGCASLNVLSLRDNRVAKLPAQLADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDEESTGEKVLTCYLLPQQP
SSSLENLLQNSVDDSWTDSNLNRVSVIQFQEETTKQEAEDDEAAAERRGLQRRATPHHSE
LKVMKKGIEERRNEAYTSRADGETESPGAEEKRLSDLSNQSHDSAASNSTASANSHEERR
GLMTTDLVGGRGPQEVEVLDEMEVEYVEPTVHFAEEPMYRGGDENGDDDEEGEDVVPHSY
EEEQQRPQFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLAQHPASHH
TAPEEEEEEEEEEEEEEEGEECMVTPQRHNRIEEPELEDRSLLHANSSLQPVKGVSFDQV
NNLLIEPARIEEEEHNLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARA
GVKVGDKLLEVNGVALQGAEHHTAVEALRSSGTAVSMSVIREHMVEPENAITTTPLRPED
DYFPRERRASGLPFCMEASSPAGPRHRRSTCLVRNDKGLGFSIAGGKGSTAYRTGDLGIY
ISRIAEGGAAHRDSTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEP
GTAGGSPGLSRARAHSPPPPEPSDSPDQEEGNDDSPHGTHLSRPLQDEYPIEEVMLVKAG
GPLGLSIVGGSDHASHPFGVSEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATH
QEAVKALLSNKQEIRMLVRRDPSPPGMQEIVIQKQTGEKLGISIRGGAKGHAGNPFDATD
EGIFISKVSSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLFMLVCDG
FDPGNAAAIEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMARETSQ
WEREEVERMRLEREEATRLLEEETENLGTGPLNLDYRTLAALPTTALQKVNRFAPSVCVT
AFMEAPLQTQCSAPLEPLGFGLGQPSTSLYHVDPHALPQSCPTMITEAEHLYMSQHSPSP
AITSFNQEAARQEAPPTGEDEEEEILVDSQPINFSENPFLVANRKGKGRPPSECILSGPP
MGYGSGGKLQPWLFSKAPSTEHPRTDSPIRDAPYSPSTQPPSAHSSTSSLCAGRETRFAS
IHFPPTALPAKNNSPLSPYETRPGSIQPLSRGGGRPSTSPGTPDGHSRDGHSSPNPFQHG
PSPINSQTSDLYGQRNNIHSNLPSPSLETPSPGGRDSPEQRSFRDRQKYFEIDMKQQTPD
SKPKGRVSLVGADDLKKMREEEERRFEQRAREYLMDDDDEEDDDLVTQMGVLKATGKVLL
DGVEYKVEPVAMPPRHYNTPPSYSATPPSYSATPSYCGSSGPSSVDGKGDSQRNSLEESF
RLDQQRPNSMTGLIPVYPGESGAPIRTAKAERRQQERLRMQSPELVPSGDKDLSPAEKRA
LEAEKRAMWRAARMKSLEQDALKAQMVIAKSREGKKRGTLDQLAESPSPAPTPSPTPLED
FSPRGVTSPGRLSPDTVDDFQFIDDGSSNPVPAEVPTATSTLEEMALYRNKRKLRQGRRS
LETAVPT
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgctgtaaccgccacgtcgagtcggtggacaagcga
cattgcaatttgcaaaatgtccctgacgagatattccgttacagccgcagtctggaagag
cttctcctcgacgccaaccaactcagagatttacccaagcctttctttagacttctgaac
ctgaggaagctgggcctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaacgacattcctgagatccccgagagc
attaagttctgcaaggcgttggagattgcagacttcagtggaaaccccctctccaggttg
cctgatggtttcactcagctgcgagggctcgcccacctggccctaaacgacgtgtcactg
cagacactgcccaatgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcgctctcttttctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagtgttgccagacacacttggtgctctccctaagctacgg
gagctgtggttggaccgtaaccagctctcctcattgccaccagagctggggaacctgcgg
agactggtgtgtctagacatgtcagagaaccgcctggaggagttgccctcggagctgagc
ggcttgctggccctcactgacctgctgctcacacaaaacctcctggaggtggtccctgac
agcattggctctctgaagcagctgtccatcttgaaagtggaccagaaccgactgacccac
ctgagcgactccataggggagtgtgagaacctgacggaacttgtgctgaccgagaatctc
ttacagactctgcctcgctcgctgggcaagctgaagaagctgaccaatctgaatgcggac
cgcaaccggctgggcggcgtacccgatgagctgggcggctgcgccagtctcaacgtgctc
tccctcagggacaaccgtgtggccaagctgcctgcccagctggccgacgccaccgagctc
cacgtgctagacgtggcagggaacaggttacagaacctcccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggatgaggagagcaccggggagaaggtgctcacctgctacctgctaccccagcagcct
tcctctagcctggagaacctgctccagaacagtgtggatgacagctggacagacagcaac
ctgaaccgcgtgtctgtcatccagttccaggaggagaccaccaagcaggaggcggaggat
gacgaggcggccgcggagcgcaggggtctccagcggcgggcgacaccacaccacagtgag
ctgaaggtgatgaagaaagggattgaggagaggaggaacgaggcctacacttccagagcg
gatggagagacggagtcccctggtgctgaggagaagcggctgagcgatctgtccaatcag
agccacgactctgcggcgtccaacagcacggcctcggccaactcccacgaagagaggcgg
ggcctgatgaccacagacctggtgggtgggcgtgggccccaggaggtggaggtgctagat
gagatggaggtggagtacgtagagcccacggtgcactttgcagaggagcccatgtaccgg
ggtggggacgagaatggtgacgacgatgaggagggcgaggatgtggtcccacacagctac
gaagaggaacaacagaggccccagttccctacggagaagcagcgtctgatcaggaaggac
acgccgcactacaagaagcacttcaagatcaccaagctgccaaaacccgaggcggtggcc
gcgttactgcagggcttcagccccgatgctcacctggcccaacacccagcctcgcaccac
actgcccccgaggaggaggaggaggaagaagaagaggaggaggaagaggaggaaggggag
gagtgtatggtaactccacagcgccacaacaggatagaagagccagagctggaggatagg
agtctgcttcatgccaactcctccctgcagccggtcaagggggtgtcatttgatcaagtc
aataatctgctgattgagcctgctcgaattgaggaggaagagcacaacctgaccattcta
cggcaaactgggggtctgggcatcagcatagccggaggaaagggatccacaccctacaag
ggggatgatgagggcattttcatctccagggtgtctgaggacggacctgcagctcgggct
ggggtcaaagtgggagacaaacttctcgaggtgaacggcgtggccctccagggtgctgag
caccacacggcggtggaagccctgcgcagctcgggtaccgccgtctccatgagcgtcatc
cgggagcacatggtggagccggagaacgccatcaccaccacgccgctgaggcccgaggac
gactactttccccgggagagacgggccagcgggctgcccttctgcatggaggccagctcc
cccgcaggcccccgacacaggcggtctacctgcctggtccgcaacgacaagggcctgggc
ttcagcatcgccgggggcaagggttccacagcctaccgcacgggggacttggggatctac
atctcccgaatcgcagagggaggggcggcccaccgagacagcacgctccgcgtcggggac
agggtcatcactatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcg
ctgcttaccggcacctcccccaccatcgccctcctggtggagcgcgaccaggccgagccg
ggcaccgcagggggctccccgggcctgtcccgcgcccgcgcccactcccccccgccccca
gagccctccgactcgcccgatcaggaggagggcaacgacgactcgccccacgggacccac
ctgagccggccgctgcaggacgagtaccccatcgaggaagtgatgttggtgaaggcgggc
ggccctctgggactgagcatcgtgggtggcagcgaccatgccagtcacccgttcggcgtc
agcgagcctggtgtcttcatctcgaaggtgatcccacatggcttggcgtgtcagagtggg
ctgcgggtcggggacaggatactggaggtgaacaccatcgacctgcgccacgccacccac
caggaggctgttaaagccctgctctctaacaaacaggagatccgcatgctggtgcgcagg
gacccctcaccgccggggatgcaggagatagtgatccagaagcagactggagagaagctg
ggcatcagcatacgtggcggtgccaaaggccacgctggcaaccctttcgacgccaccgat
gagggcatcttcatatccaaggtgagctccagtggtgcagcggccagagacggccgtctg
ctggtgggcatgcggatcctggaggtgagcaaccacagcctgctgggcatgacccacacg
gaggccgtgcgcgtgctccgcgccgtgggagacaccctgttcatgctggtgtgtgacggc
ttcgacccaggcaacgctgccgccatagaggcgtcgccgggcatcattgccaacccgttt
gcggcgggcatcgtgcgtaagaacagcatggagagcatctcctctatagaccgagacctg
agtcccgaggagatggacatcctacagaaggaggtggagatggcgcgagagacgtcccag
tgggagagagaagaggtggagcgtatgcgcttggagcgtgaggaggctactcgcctgcta
gaagaggagaccgagaacctgggcactggacctctgaatctggactaccggacgctggct
gcactgcccaccaccgctctgcagaaggtcaacaggttcgctccctctgtctgtgtgact
gccttcatggaggcccccctacagacccaatgttctgcccccttagagcccctgggcttt
ggcctggggcagccctccacctccctctaccacgtggacccccatgctctgcctcagtcc
tgccccactatgatcacagaggccgagcacctctacatgtcccagcactctcccagtcct
gccatcacctccttcaatcaagaagcagctagacaggaagccccgcctaccggtgaagat
gaagaggaggagattctggtggactcccagccaattaacttcagcgagaaccccttcctg
gtggccaatcgcaagggaaagggccgccccccctcggagtgtatcctatcagggcctccc
atgggctacgggagcggcggcaagttgcagccctggttgttcagcaaggcaccctccact
gagcaccccaggacagacagtcccattagagatgccccctactcgcctagcacacaaccg
cccagtgctcattcctccaccagttccctgtgtgcaggcagggagacccgcttcgcaagc
attcatttcccccccactgcactgcctgccaagaataactcgccattgagtccctatgag
acgaggccgggttccatccagccactctctcgtggtggcgggcgaccaagcacctcgcca
ggcactccggacgggcacagcagagacgggcacagcagtcccaaccccttccagcatggc
ccctctcccatcaactcccagacctctgacctgtatggccagaggaacaacatccactcc
aacctgccttctccttctctagagactccatctcctgggggcagagacagcccagagcag
cgctccttcagggacagacagaagtactttgagatcgacatgaagcagcagacgcccgac
agcaagcccaaaggccgcgtgtccctggtgggagcagatgacctgaagaagatgagggag
gaggaagagaggagattcgagcagcgggcgcgggagtacctgatggatgacgatgatgag
gaggacgacgacctggtgacgcagatgggagtgttgaaggccacgggcaaggtgttgctg
gacggggtggagtacaaggtggagcctgtggccatgccccccaggcactacaacacgccc
cccagctacagcgccacgccccccagctacagcgccacgcctagctactgtggcagctca
gggccttcgtcagttgatggtaaaggagactcccagaggaattccttagaggagagcttc
aggttggatcagcagcggcccaactccatgactggtctgatcccagtgtaccctggagag
tcgggggctcccatccggacggccaaggcagagcggaggcaacaggagcggctgaggatg
cagagtccagagctggtcccgtccggagacaaggacctgtcccccgccgagaaacgggct
ctggaggctgagaagagagccatgtggagggcagcaaggatgaagtctctggagcaggat
gctctgaaggctcagatggtcatcgctaagtctcgggagggaaagaagcgtggcacgcta
gaccagctggccgagtcaccctcgcccgcccccacgccatcccctacccctctggaagat
ttcagtcccagaggagtgacgtcaccaggcagactgtcccctgacacggtcgacgacttt
cagttcattgacgacggctccagtaaccctgtgcccgctgaggtccccactgccacctca
acgctggaggagatggccctctacagaaacaagcgcaagctgaggcagggccgccgcagc
ctggagaccgccgtgcccacataa
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