KEGG   Oncorhynchus keta (chum salmon): 118373102
Entry
118373102         CDS       T09424                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118373102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118373102
Spliceosome [BR:oke03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118373102
 Complex B
    118373102
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 118373102
NCBI-ProteinID: XP_035615064
LinkDB
Position
4:complement(29871845..29890108)
AA seq 549 aa
MMENGQGTGGKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA
VTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW
DSVTMKHKGFAFVEYEIPEAAQLALEQMNSVMLGGRNIKVGRPGNIGQAQPIIDQLAEEA
RAYNRIFVASVHPDLSDEDIKSVFEAFGRIKSCTLARDPTTGRHKSFGFIEYDKPQSSLD
AVSSMNLFDLGGQYLRVGKAVTPPMPMLTPTQPGGLPPAAAVAAAAATAKITAQASMIPF
QRDLLAFQEAVTGASILGAMAGANQMGQMSQMGQMGPMGSMGIPQAVMAAQAPGMITGVY
RDMCVTPVRPNLPVLPQVGLVNPVLASPPVITNPAQINPSLQELQKKKQEEKEMLQDGTG
QEMLSDQEHMSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKF
GAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMVSEMNKAIQALNDRWFGGRKVIAEVYDQE
RFNSSDLSA
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgatggagaatggacagggcacaggtgggaagcttggcctgccgcctctcaccccggag
cagcaggaggctctacaaagggcaaagaaatatgccatggagcagagcattaagagtgtc
ttggtgaagcagaccattgcccatcagcaacagcagctcaccaacttgcagatggcagca
gtgacaatgggctttggagatcctctctcacctttacaatcggtggcggctcagcgtcag
cgtgctctagccatcatgtgccgggtgtatgtgggctccatatactatgagctcggggag
gataccatcagacaggcctttgccccttttggccccatcaagagcattgacatgtcatgg
gactccgttacaatgaagcacaagggctttgcctttgtggagtatgagatcccggaggcg
gcacagctggctttggagcagatgaactcagtcatgcttgggggcaggaacatcaaggtg
gggcggccaggtaacattggtcaggcgcaacccatcatcgaccagctggcagaggaggcg
cgcgcctacaaccggatcttcgtggcttccgtccaccctgacctctcagacgaggacatc
aagagcgtctttgaggccttcgggaggatcaagtcctgcacgttagccagggaccccacc
acaggaagacacaagagctttggcttcatcgagtatgacaagccccagtcctccctggat
gcagtgtcctccatgaacctgtttgacctggggggccagtacttgcgggtgggcaaggcc
gtaaccccgcccatgcccatgctgacccccacccagcctggtggcctgccgcccgctgca
gccgtggctgctgcagcagccaccgctaagataacggcccaggcaagtatgattcccttc
caaagggatctattggccttccaggaggctgtgaccggggcgtccatcttgggggcgatg
gccggggcgaaccagatgggccaaatgagtcagatgggacaaatgggtccgatgggctct
atgggcatccctcaggcagtcatggctgcccaggcccccggaatgatcacaggtgtgtat
cgagacatgtgtgtgacaccagtgcgtcctaacctgccagtgctgccccaggtgggcctg
gtcaaccctgtgctggcctcaccacctgtgatcaccaacccggcccaaatcaacccctct
ctacaagagcttcagaagaagaagcaggaggagaaagagatgctgcaggatgggacaggc
caggagatgttgagcgaccaagaacacatgagcatttccggaagcagcgccaggcacatg
gtcatgcagaaactgctgaggaaatcagagtctacggtgatggtgttacggaacatggtg
gggccagaggacatcgatgatgacctggagggcgaggtgacagaggagtgcggcaagttt
ggtgccgtaaaccgggtcatcatctaccaggagaagcagggggaggaggaggatgcagag
atcatcgtcaagatctttgtggagttctccatggtttcggagatgaacaaggccatccag
gcactcaacgaccgctggtttgggggtcgcaaggtcatcgcggaggtctacgaccaagag
cgctttaacagtagtgacctctccgcataa

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