Oncorhynchus keta (chum salmon): 118373237
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Entry
118373237 CDS
T09424
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118373237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118373237
03036 Chromosome and associated proteins [BR:
oke03036
]
118373237
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118373237
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118373237
PBAF complex
118373237
GBAF(ncBAF) complex
118373237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
118373237
NCBI-ProteinID:
XP_035615220
LinkDB
All DBs
Position
4:complement(30162961..30214464)
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AA seq
506 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPFGGSPTVRPGL
PAPVMEPSRKRPAPSQQVQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHT
QTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPD
PIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIE
SINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQE
AVSRYFYSKIQQRRQELEQALAVRNT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcagggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccgtctggagcgaggatgccccaccagggt
gctcccatgggcccccccggacccccgttcggtgggagccccacggtgcggcccggccta
cccgcgccggtcatggagcccagccgcaagagacctgccccctcccagcaggtccagcaa
cagcagaacgtccagaaccgggccagaaagaagccagtgggattccccggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattcttccacagaggatccgtgagctggtcccg
gagtcccaggcttacatggacctgttggcctttgaacgtaaactggaccagaccattatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcctgacgctgacgactcagacggc
agtattgcatcatgggagctgcgggttgaggggaagctgctggatgatcctgggaagctg
aagaggaaattctcctcgttcttcaagagcctggtgatcgagctggacaaagacctgtat
ggtcctgacaaccacctggtagagtggcaccgcactcccaccacccaggagacggacggc
ttccaggtgaagaggccaggggacgtgagcgtgcgctgcacactgctgctaatgctagac
taccagcccccccagttcaagctggaccctcgtcttgctcgcctgctgggtatccacacc
cagacccgctcctgtatcatccaggccctgtggcagtacgtcaagaccaacaagctgcaa
gactcccacgacaaggagtacatcaactgtgacaagtactttcagcagatctttgactgc
ccgcggctcaagttctcggagatcccccagcgtctcaccaacctcctcctgccccctgac
cccatcgtcatcaaccacgtcatcagcgtggaccctaatgaccagaagaagacggcgtgc
tatgacatcgacgtggaggtggaggaccccctgaagagccagatgagcagcttcctgctc
tccactgccaaccagcaggagatcgcctcactggacaacaagatccacgaaaccattgag
tccatcaaccagttaaagatccagagggactttatgctcagcttctccagagaccctaag
ggctacatccaggactggctcaagtcccagagcagagacctgaagctgatgacggacgtg
gtggggaacccggaggaggagaggagggcggagttttaccacgagccctggtctcaggag
gccgtcagtcgttacttctacagtaagatccagcagaggagacaggagttggagcaggcc
ttggctgtgaggaacacctaa
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