Oncorhynchus keta (chum salmon): 118373309
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Entry
118373309 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118373309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118373309
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
118373309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
PH
SH3_9
SH3_1
Ank_4
BAR
SH3_2
Ank_3
Ank_5
PH_8
YjcZ
DUF4404
Motif
Other DBs
NCBI-GeneID:
118373309
NCBI-ProteinID:
XP_052361426
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All DBs
Position
4:30248844..30318974
Genome browser
AA seq
1131 aa
AA seq
DB search
MRSSSSRPSNFSSKDSLWNPSRMPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCRNTVN
ILEEALDQDRTALQKVKKSVKAIYSSGQDHVQNEENYAQALDKFGSNFISQENPDLGTAF
VKFSTLTKELSTLLKNLLQLQNHNVIFTLDSLLKGDLKGVKGDIKKPFDKAWKDYEAKFT
KIEKEKREHAKQHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQ
NLIKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQ
LDQKEDSQSKQGGYSMHQLQGNKEFGCEKKGYLMKKSDGLRKVWQRRKCSVKGGMLTIAH
ATSNRQPVKLNLLTCQVKPCAEDRKCFDLISHNRTYHFQAEDEQEFVIWISVLSNSKEEA
LNMAFRGEEDGVGGEDGLEDLTKAIIEEVLRMPGNEVCCDCGAADPKWLSTNLGILTCIE
CSGIHREMGVHISRIQSMELDKLGTSELLLAKNVGNSSFNEIMEENLPGPSPKPTPSSDM
TVRKEFINAKYVDHKFARKTCTSSAAKTIELCEAVKSRDLLSLIQVYAEGVELMEPLPEG
GQEAGETALHYSVRTADQTSLHLVDFLVQNSGNLDKQTEWGNTALHYCCMYEKHECLKLL
LRGKPATDITNQNGETALDIARRMKNSQCEEALVQAAAGKYYPHVHVEYEWSLRLEELDE
SDDDLDDKPSPIKKDRSPRPQSFCHSSSLSPHDKLSLPGFISHRDKQQRMSYSAFTNQMY
SASTDLTSSSPVADAPPLPPRNQGKAPPSTLTPGGSSTLSKKRPPPPPPGHKRTLSDPPS
PLSHSRGGIYVGSDSIPPPANKMSPLSNKFEGIPQQQSTTSSNTKSTLGPRVLPKLPQKV
ALRKIDTIHPSMDKPGLPPEVLQKSPPGPECLTKAILPDKPQLGDLXPKPQPSELPPKPG
ELPPKPQLSDLPPKPQLGDLPPKPLLKDLPPKPQLSQDGHPKPGVADLPSPRPPPGEPAP
KPHPPESAAANQQAETESPSSQGSEDTNGSPACAPDTPVPLPRKNTGKTKSRRVKTIYDC
QADNDDELTFVEGEVIIVTGEEDGEWWIGHIEGHPERKGVFPMSFVHILSD
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgagatcctcctcttcccgtccgtcaaatttctcatctaaagattctttatggaatccg
agtcggatgcctgatcaaatatcggtgtccgagtttctctcggagacaaccgaggactac
aattctccgaccacatccagcttcacgacccgtttgcagagctgtaggaacacagtcaac
attctggaagaggctttggatcaggacaggactgcgctgcagaaggtgaagaaatcggtc
aaggcgatctacagctcaggccaagaccatgtccagaatgaggagaactatgcccaggct
ctggataagtttggcagcaacttcatcagccaagaaaaccctgacctgggaacagctttc
gtcaagttctccaccctgaccaaggagctgtcaaccctgctcaagaacctgctccagctc
cagaaccataatgtgatcttcaccctggactctctgctgaagggggacctgaaaggcgtg
aaaggagatatcaagaagccctttgacaaagcctggaaggattatgaagctaaatttaca
aagatcgagaaggagaagagggagcatgccaagcagcacgggatgattcgtacagagata
acaggagctgagattgctgaggagatggagaaggaacgccgtctcttccaactccagatg
tgtgagtacctgatcaaagtcaacgagatcaagaccaagaagggagtggaccttctccag
aacctcatcaagtattaccacgcacaatgcaacttcttccaagatggcttgaagacggcg
gataagctgaagcagtacattgagaagctggctgctgacctctacaatataaagcagacc
caggacgaggagaagaaacagctgacggctctcagagacttgatcaagtcatcccttcag
ctggaccagaaggaggactcccagagtaagcagggtggctatagtatgcaccagctgcag
ggcaacaaagagtttggctgtgagaagaaaggctacctgatgaagaagagtgatgggctg
agaaaggtgtggcagaggaggaagtgttcagtgaagggtggcatgctcaccatcgctcat
gctacgtccaacaggcagcctgtgaaactcaacctgctcacctgccaggtcaagccctgt
gctgaggacaggaagtgcttcgacctcatttcccataaccggacctatcacttccaggct
gaggatgaacaggagtttgtcatctggatctctgtgctatccaacagtaaggaggaagct
ctgaacatggcgttccgcggagaagaggacggagtaggaggagaggatggcctggaggac
ctgaccaaagccatcatagaggaggtgctgcgcatgcctggcaatgaagtctgctgtgac
tgtggcgctgcagatccaaaatggctgtccactaacctgggcatcctgacctgcatcgag
tgctctggaatccaccgggagatgggagttcacatctcacgcatccaatccatggagcta
gataagctaggcacctctgaactcttgctggctaagaacgtagggaacagtagtttcaat
gaaataatggaggagaaccttcctggtccctcacccaaacccacaccttcaagtgacatg
acagtgaggaaggagttcatcaatgctaaatatgtggaccacaagtttgcacggaagacc
tgtacctcctcggcagctaagaccatcgagctgtgtgaggcggtcaagtccagggacctg
ctgtctctcatccaggtgtacgctgagggggtggagctaatggagccactgcccgagggt
ggacaggaggccggagagactgcgctccactactctgtgcgcaccgccgaccagacttca
ctacaccttgtggacttcctcgtacaaaacagtgggaacctggacaagcagacagagtgg
ggaaacactgccctgcactactgctgcatgtacgagaaacacgaatgcctcaaactactg
ctgaggggcaaaccagccactgacatcaccaatcagaatggtgagacggcgctggatatt
gccaggcgtatgaagaacagtcagtgtgaggaggcactggtgcaggcggcagcggggaag
tattacccacatgtccacgtggagtatgagtggagcctgaggctggaggagctggacgag
agcgatgatgatctcgatgacaagcctagtcccataaagaaggaccgttccccgcggccc
cagagtttctgccactcgtccagcctgtctccccatgacaagctgtctctgccgggcttc
atcagccaccgggacaaacagcagcgcatgtcttacagcgccttcaccaaccagatgtac
tccgcctccaccgacctcacttcctcttcccccgtggcagacgccccccctctacccccc
aggaaccagggcaaagctcctccctccaccctcacccccggaggcagctccaccctgtcc
aagaagaggcctccgccccctccccccgggcacaaacgcaccctgtctgacccacccagc
ccgctttcccacagtagagggggcatttacgtgggaagtgactccatccctccacctgcg
aacaagatgtcaccgttatccaacaagtttgagggcattccacagcagcaaagcactact
tctagcaacacaaagtctacacttggtccaagggttctacccaaactacctcagaaagtg
gcactgcgtaaaatcgacaccatacacccatctatggacaaacccggtctgcctccggag
gtgctccagaaatcccctccaggacctgaatgcctaacaaaagccattctgcccgacaag
ccccaactaggggacctcnnccccaaaccccagccctctgagctgccccctaaacctgga
gaactgccacccaagccccagctctccgacctcccccccaaaccgcagctaggggaccta
ccacctaaacccctgctcaaagacctacccccgaaacctcagctctcccaagacggccat
ccgaaaccgggggtagcagatctgcccagtccaagaccaccccctggagagcctgcgccg
aagccccaccccccggagtcagcggcggccaatcagcaggcagagactgagagtccatct
tcccagggcagcgaggacaccaatgggagcccggcgtgtgctccagacacaccagtgccc
ttgcccaggaagaatacggggaagaccaaatctcggcgggtaaagaccatctatgactgc
caagccgacaatgatgacgagctgacatttgtggagggagaggtgatcatagtgacggga
gaggaggacggggagtggtggatcggacacattgaagggcacccggagaggaaaggtgtg
ttcccaatgtcctttgtccacatcctgagtgactga
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