Oncorhynchus keta (chum salmon): 118373431 Help Entry 118373431         CDS       T09424                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06236   collagen type I alpha Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04510   Focal adhesion oke04512   ECM-receptor interaction oke04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oke00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118373431  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     118373431   09142 Cell motility    04820 Cytoskeleton in muscle cells     118373431  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oke00536]     118373431 Glycosaminoglycan binding proteins [BR:oke00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118373431 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  118373431 NCBI-ProteinID:  XP_052327313 EnsemblRapid:  ENSOKEG00005000493 LinkDB All DBs Position 2:7806235..7840753 Genome browser AA seq 1460 aa AA seqDB search MFSFVDIRLALLLSATVLLARGQGEDDSGFGSCSLDGQQYNDKDVWKPEPCQICVCDSGT VMCDEVICEDTTDCADPIIPDGECCPICPDDSETEGPQGPVVSETEGPEGGVGPKGDDGP EGVPGNDGMDGQPGLPGPPGPPGPPGLGGGNFSPQMHHGYEEKSSGGQAQQGPMGPMGPR GLAGPPGNTGPPGHHGPPGEPGEPGGAGPMGQRGPMGPLGKNGDNGEPGRSGRPGERGSA GPQGARGTPGTPGLPGIKGHRGFNGMDGAKGDGGPAGPKGEGGSPGSSGNPGAMGARGLP GERGRPGPAGPSGGRGNDGNSGPAGSPGPTGPSGSPGFPGGAGAKGETGPQGGRGSDGPQ GSRGEPGNPGPAGAAGPSGAPGSDGQSGGKGATGAVGISGAPGFPGSRGPAGPPGAGGGP GPKGNHGEQGAQGSKGEPGVKGEPGSSGPGGPPGPSGEEGKRGARGEPGGAGGAGPPGER GMPGMRGFPGSDGAAGGKGGPGERGANGPMGAQGATGEAGRPGEPGMPGSKGMTGSPGSP GPDGKVGPAGITGNDGRSGPPGSSGSRGQPGVMGFPGPKGPAGDSGKPGERGEAGAVGGV GAPGKDGDSGAPGPQGPAGGQGEKGEGGPAGPNGFQGLPGTQGATGEPGKAGDQGVPGEV GGPGPSGSRGDRGFPGERGGIGSVGPSGPRGPNGSPGNDGARGETGVAGAPGGMGAPGLQ GMPGERGSGGNSGAKGERGDGGPKGADGGPGKDGMRGMTGPIGPPGPTGAHGEKGEGGLG GPPGPAGGRGSPGERGEHGAPGPAGFAGPPGADGQPGNKGENGNNGPKGDAGAPGPGGPV GAPGPQGPAGNAGTKGTRGAAGPPGASGMPGPGGRVGPPGGSGAPGPPGPPGPSGKEGQR GGRGETGHAGRPGEAGAAGPPGPSGQSGAKGNDGPMGAPGTPGPGGIAGQRGIVGGPGGR GASGSPGVPGQAGEPGKQGPGGPVGERGSPGPMGPPGLSGAPGEAGREGSTGHDGVAGRD GPPGPKGDRGENGNAGSPGAPGPPGAPGPSGASGKTGSRGESGPAGPAGPNGPAGGRGGL GPAGARGDKGEAGEGGERGHKGHRGLSGMPGLPGPAGSPGESGPAGLNGPSGPRGPHGSS GSTGKDGMNGLPGPIGPPGPRGRNGEMGPAGAPGSPGLPGPPGPAGGGFHVAPIYNQEKG PDPMRGGGGYHYRADEPDMMNDRDMEVDTTLKSLSQKVENIRSPEGTQKNPARMCRDIRM CHPEWKSGQYWVDPNQGSPLDAVQVFCNMETGETCIYPSQDTVPMKNWYTSKNIREKKHI WFSESMDNGFQFQYGSEGSNPEDVNIQLTFMRLMSNEASQNVTYHCKNSVAYMDKGTGNL KKALLLQGSNEIEIRAEGNSRFTYTVSEDGCTSHTGTWGKTVIDYKTSKTSRLPIIDIAP MDVGAPDQEFGVEVGPVCFV NT seq 4383 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagcgctgttgctgagcgcaacagtactattggcg agaggtcaaggagaggacgatagtggattcggcagctgctcgttggacggccaacagtac aatgataaggatgtgtggaaacctgaaccctgccagatctgcgtctgcgacagcggaacc gttatgtgcgatgaagtgatttgcgaggacacaaccgactgcgccgaccctatcatcccc gacggcgaatgctgtcctatctgccctgatgactccgagacagagggtccccaggggcca gtagtgtctgagacagagggaccagagggaggagttggccccaagggtgatgatggtcct gagggtgttcccggtaacgatggcatggacggccagcctggccttcccggccccccgggc ccccctggacctcctggccttggcggtggaaacttctctcctcagatgcaccacggttat gaggagaaatccagtggcggccaggcccaacagggaccaatggggccaatgggtccccgt ggtctcgctggcccaccaggaaacactggtccccccggtcatcatggtccccctggcgag cccggtgagcctggtggtgctggtcccatgggtcaacgtggtccaatgggccccctaggc aagaacggagataatggtgagcctggcaggtctggtcgtcccggtgagcgtggttccgcc ggccctcagggtgcccgtggaacccctggaactcctggcctccccggcattaagggacac agaggtttcaatggaatggatggtgccaagggagacggtggcccagccggccctaaggga gagggtggttcccctggatccagcggtaaccccggtgctatgggtgctcgtggtcttcct ggtgagagaggccgccccggacccgctggcccttctggtggccgtggtaatgatggtaac tctggtcctgctggatcccctggacccactggcccatctggttcccctggattccccgga ggcgctggagctaagggtgagactggtcctcagggaggccgtggctcagacggaccccaa ggatctcgtggagagcccggtaaccctggacccgctggtgctgctggaccctctggtgcc cccggaagtgatggccagtcaggaggcaagggtgccactggtgctgttggtatctctggt gctcctggtttcccaggatcccgtggccctgctggacctcccggagctggtggtggcccc ggccccaagggtaaccatggtgagcaaggagcccaaggctccaagggagagcctggtgta aagggagagcctggttcctctggtcctggcggcccccccggtccatctggggaggaggga aagagaggtgcccgtggtgagcctggtggagctggtggtgctggaccccctggggagcgt ggtatgcctggtatgcgtggtttccccggctctgatggagctgccggtggcaagggtggc cctggtgagcgtggagccaatggaccaatgggagcccaaggtgccactggtgaggctggt cgccccggggagcctggcatgcctggatccaagggtatgactggtagccctggcagccct ggccccgatgggaaagttggccctgctggtatcactggaaacgatggtcgttccggaccc ccaggctcctctggatccagaggtcagcctggagttatgggattccctgggcccaaagga cctgctggtgacagcggcaagcctggtgagagaggagaagccggagctgttgggggtgtt ggtgcccctggcaaagatggtgactctggtgctcccggaccacaaggccctgctggaggt caaggagagaaaggagagggcggccccgctggtcctaacggattccagggtctgcctgga actcagggagctactggtgagcctggcaaggctggtgatcagggtgtgcctggtgaggtt ggaggtcccggccccagtggatccagaggtgacagaggtttcccaggtgagcgtggtggc atcggctctgtcggcccctctggaccccgtggacctaatggttctcctggtaacgatggt gctaggggtgagactggagttgctggtgcccctggcggtatgggagccccaggtctgcaa ggaatgcccggagagcgtggctcaggtggcaactccggtgccaagggagaacgaggtgat ggtggccccaagggagccgacggtggcccaggaaaagacggcatgcgtggtatgactgga cccatcggaccccctggacccactggtgctcatggagagaagggtgagggtggtcttggc ggcccccctggtcccgctggaggtcgcggttcccctggtgagcgcggtgagcatggtgcc cctggacctgctggattcgcaggaccccctggtgctgatggtcagcctggcaacaaggga gagaatggtaacaacggccccaaaggtgatgctggtgctcctgggcccggtggaccggtt ggtgctcctggacctcagggtcctgctggtaatgctggtactaaaggaactcgtggtgct gctgggccccctggtgcttctggtatgcctggtcctggtggaagagttggccctcctggt ggaagtggagcccccggacccccaggccctcccggcccctctggtaaagagggacagagg ggtggacgtggtgaaactggtcacgctggtcgccccggtgaggctggagccgccggaccc ccaggaccctcaggacaatctggagccaagggtaatgatggcccaatgggagccccagga acccccggacccggaggtattgctggccagcgtggtattgtggggggcccaggaggaagg ggagccagtggtagcccaggagttccaggacaagctggggagcctggtaagcagggacct ggcggccccgtcggtgagcgtggatcccctggccccatgggaccccctggcctgtctggt gcacccggtgaggctggtcgtgagggttccactggtcacgatggtgttgccggtcgcgat ggaccccccggtcccaagggtgaccgtggtgagaatggtaatgctggttcccctggtgct cctggacctcccggtgcccccggtccatctggtgcttctggcaagactggtagccgtgga gagtctggtcctgctggtcctgctggccctaacggtcctgctggtggtcgtggaggtctt ggccctgctggtgctcgtggagacaagggagaggctggagagggtggagagagaggccac aagggacacagaggtttgagcggcatgcccggacttcctggacccgctggatcccctgga gagtctgggcctgctggacttaacggaccttctggaccccgaggaccccatggttcttct ggctccactggtaaagatggcatgaatggtctgcctggacccatcggaccccccggaccc cgtggtcgcaacggagagatgggacctgctggtgctcctggttctcctggtctgcccgga cctccaggtcccgctggcggcggcttccatgtcgcaccgatctacaaccaggagaaggga cctgaccccatgcgaggaggaggaggataccactaccgtgctgacgagcctgacatgatg aacgaccgtgacatggaggtggacaccaccctgaagagcctcagccagaaggtggagaac atccgcagccctgagggaacccagaagaaccccgcccgcatgtgccgtgacatcaggatg tgccaccctgaatggaagagcggccagtactgggtggaccccaaccagggctctcctctg gatgctgtccaggtcttctgcaacatggagactggagagacctgcatctacccatcccag gacactgtccccatgaagaactggtataccagcaagaacatcagggagaagaagcacatc tggttctcagagtctatggacaacggcttccagttccagtacggtagcgagggctccaac ccagaggacgtcaacatccagctgaccttcatgcgcctgatgtccaacgaggcatcccag aatgtcacgtaccactgcaagaacagcgtggcctacatggacaagggcacgggcaacctg aagaaggccctgctgctccagggatctaacgagatcgagatcagagctgagggcaacagc cgcttcacatacactgtcagcgaggacggctgcacgtcacatactggcacatggggcaag acagtcatcgactacaagacatcaaaaacatctcgcctgcccatcattgacattgctcct atggacgttggtgcacctgatcaggagtttggcgtcgaagttggccctgtctgcttcgta taa

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