Oncorhynchus keta (chum salmon): 118373441
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Entry
118373441 CDS
T09424
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118373441
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
118373441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
118373441
NCBI-ProteinID:
XP_035615462
LinkDB
All DBs
Position
9:complement(41146435..41163018)
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AA seq
395 aa
AA seq
DB search
MMVHCAGCDRPILDRFLLNVLDRAWHAKCVQCCECHCNLTEKCFSRDGKLYCKIDFFRRF
GTKCAGCLQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYL
SSGAIKEVNLNSVSSCTDRSLSPDLQDPIQDDTKETDNSMSSDKDMNNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRGPRRMRPLGGRLEDPDILGPGAYGYYTEYQGDYYGGGGNYDFFPHGP
PSSQAQSPAESPYIHGGAMEGSVSAHHPSDDQRFTDMISHADTPSPEPGLPSSLQPVPGE
VYGGGPSPPFSLASNSSYSAPMSHPGQEMGETTVW
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccactgcgcggggtgcgacaggcccatcctggaccggttcctgctcaacgtg
ttggaccgagcctggcacgccaagtgcgtccaatgctgcgagtgccactgtaacctgacg
gagaagtgcttctcgcgtgatgggaagctttattgtaaaatagactttttcaggaggttt
gggacgaagtgcgcgggctgcctccaaggcatctctcccagcgatcttgtgcgcaaggcg
cgcagcaaggtgttccacctcaactgcttcacgtgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctatgtcatcgacgaaaataagtttgtgtgcaaagaagactaccta
agctcaggggctatcaaggaagtcaatttgaattcagtgtcatcatgcacagacagaagt
ttatcgccggacctccaggacccgatacaggacgatacaaaagagacggacaattccatg
tcctcggacaaggacatgaacaataacgagaatgaggagcagaattcgggcacgaagcgg
cgaggcccgcggaccaccatcaaagccaagcagctggagacgctgaaggctgccttcgtg
gccacgccgaaacccacacgacacattcgggaacagttggcccaggagacgggactcaac
atgcgggttatacaggtgtggttccagaaccgtcgatctaaggagaggaggatgaagcag
ctgagtgctctgggggcccggcggcacgccttcttcagagggccccggaggatgaggccc
ctgggaggacgactggaggatccagacatactggggcctggggcctatggatactacaca
gagtaccagggcgactactacggaggagggggaaactatgacttcttcccccacggccct
ccctcctctcaggctcagtctccagcagaatccccctatatccatggaggggccatggag
ggctctgtgtcagcccaccacccctctgatgaccagaggttcacggacatgatctcccac
gcagacacccccagccctgagcccggcctgcccagctccctgcagcccgtccctggggag
gtgtatggaggggggcccagcccacccttctccctggctagtaactctagctacagcgcc
cccatgtcccaccccggacaggagatgggagagaccaccgtctggtag
DBGET
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