Oncorhynchus keta (chum salmon): 118373487
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Entry
118373487 CDS
T09424
Name
(RefSeq) matrin-3-like
KO
K13213
matrin 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118373487
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118373487
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
118373487
NCBI-ProteinID:
XP_052343437
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All DBs
Position
30:complement(9555204..9569301)
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AA seq
1193 aa
AA seq
DB search
MSQKIPSDSSQKGFAVGRGLLAAAETLNFSMNEQRSDSLHHGSTSRQLHGMSSGMGGGEC
DPQLSRRGGGSSHIGNSIKLFSSLGLSLADLDVLAQIPEDSISVETLPHLIMQLKNRKVD
SDRRMAGSSRGDLSGLSSEPSYRASRDDWDDMRVGKLGGSMGQASAHAQQGDLGYNSIQD
TSAGRYELDYGHGSGGRDPGWYSDLSRDRYSGMGMGPPSAADSVFMTRRMGSPSQGKVQD
FLGVIPHMFPHVCSLCDFDVHSTMEWNQHTDGLRHTENQRLLLQMYPEWDPHMATSRSGG
SHLLETTNQSDGLLGPIPIVERQQAGGGRMNSGWGGGAGSNVGSGKPHQHSMALKQIRSK
VVVAKYDRSPLSNKALFALVEPFGTLCEHLVLKNKAFLEMETHKEARDVVSYYQQNPALL
HGKQITCYLSKELMVIRKDSRTERINREAKQGKEPAAVNQSQVVFFSNLPRENEKKQELL
TIARRFGTVEKHLFLTDESFVQLGSAEDAEMLVKYYTLNPLTIQGKTVRLNICTKYKTLN
VCNSVGNRSNTLMDDKRRRSNSSTGPKDRSSSRSGKSSSSSKAKEDKKEPPKKGEDCGAE
RKGERSGGDGEGSGDEVAGVMEGDDAEECKGEGDQGSRDDGSSEDKAEDVTEDPETAANT
SLESPEEKEPAPDSDDVPSTAKVLSSGDVTEKAEESEVEEGTVPAPEEKAEGEPESEQME
TEATTDKPETEDKDDMPSAEPAESSEMHEEQLPADQEEGSMEQDFPENMDDFVTLDELAE
DEDLERQDSSSKVKYSSSGSSKKIGGLRVVNVVGFKRAYGFLNEILALAKPFGTVVQHLV
LDVRPEAFLQLNSEEEAKAMVNFYSGNVTPTVCGKFVKIYHSQTYATIQSGRVVYVGQIP
HFKSSDASLLKIAEPFGKVRRYFLNRSRNECFIEMERGEDAERMSETYKDTPPKFEGKRL
TVYVSRKYKQLKYGHRPPAPDSEEKKRSSKRERSGSETSSHRSSAAKSSAKQDEEPPVKK
SREETASSSADEPDKEDEEEMVETPTEQSEVEVRKEEDEVQGEHEHGQPSETSAVHKIDT
DMNIKMEENETAISIVSVRSVENGETGCTPSQAEGKLSSTSQVPLGPYESNNPVGVEYVK
MGYYCRVCFLFYSNEETAKKIHCSSQSHYQKLKKHLEKEKAKAQSTTGTKTPV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaagattccatctgatagctctcagaaaggctttgctgtgggacgcgggctt
ctggctgctgctgagaccctcaacttcagcatgaatgaacagcgttcagacagtctccat
catggctcaacctccagacagttgcacggcatgtcctcgggtatgggtggtggtgagtgt
gacccgcagctgtcccgtcgtggtggcggcagcagccacattggcaactccataaagctg
ttttccagcttgggcctgtcgctcgctgacctggacgtgctggcacagatcccagaagac
agcattagtgtggagaccttgcctcaccttataatgcagcttaagaaccggaaggtggat
tctgacagacgcatggcaggcagctctagaggggacctgtccgggctctcctctgagccc
tcatacagagccagcagagatgactgggatgacatgcgtgttggcaaactgggtggttcc
atggggcaagcttcggcccacgctcagcaaggagacttgggctacaattccatccaagac
acttcagctggaaggtacgaactcgactatggccacggcagtggtggaagagatccaggg
tggtattcagatctttcccgtgatcgctacagcggtatgggcatgggtcccccttcagcg
gcagacagtgtctttatgaccaggagaatgggatccccgtcccaaggcaaagtgcaggac
ttcttaggagttatacctcacatgtttccccatgtgtgctctctttgtgattttgacgtg
cactctaccatggagtggaaccagcacacagatggattacgccatacagaaaaccagagg
ctcctcctgcaaatgtacccagaatgggatccacacatggccacaagcagaagcggtggg
tctcatctactggagacaaccaatcaatcagacggtcttctgggaccaatccccattgtt
gaaaggcagcaggcaggaggagggcgcatgaactccggttggggtggtggtgctggatct
aatgttggatcaggcaagccacatcaacactctatggcacttaaacagatcagaagcaaa
gtcgtggtggccaaatatgacaggagtcctctgtctaacaaagccctgttcgccctggtt
gaaccctttggaactctctgtgaacacctggtactgaagaacaaggcctttttagaaatg
gagactcataaggaagctagggatgtggtgagctactaccagcagaacccagcgctgttg
catgggaaacaaatcacttgttatctgtccaaggaactcatggtgattcggaaagacagc
agaactgagagaatcaaccgggaggcgaaacaaggcaaagagccggcggcggtgaaccaa
tcgcaggtagtcttcttctccaacttgccgcgtgagaacgagaagaagcaggaactcctc
accatcgcgcggcgcttcggcaccgtggagaaacacttgtttctaactgatgagtctttt
gttcagctggggtctgcagaggatgctgagatgttggtgaagtactacactctaaatcca
ctgaccatccagggaaagactgtccgtttaaacatctgtaccaagtacaagaccttgaat
gtctgtaacagtgtgggtaatcgctccaacacactgatggatgataagagaaggagaagc
aacagtagtactgggcccaaagacagaagttcttccagaagtggtaaatcttcctctagc
agcaaagccaaagaggacaagaaggaaccaccaaaaaaaggagaggactgcggtgcagag
agaaagggggagaggtcaggaggagacggggaggggtcaggtgatgaggtggctggtgtg
atggagggagatgacgctgaggagtgcaaaggagagggagaccaaggttcacgtgatgat
gggtcgtcagaggacaaggctgaagacgtgacggaagacccagagaccgctgccaacacc
agtctggaatccccggaggagaaggaacctgctccggactccgatgacgttccgagcact
gccaaggttctgagcagtggtgatgtcacagagaaggctgaggagtcagaggtggaggag
gggactgtgcctgctccagaggagaaagcggagggagagcctgagagtgaacagatggaa
actgaagccactacagataagccagagaccgaggacaaggatgacatgccgtcggcagag
ccagcagagagctcagagatgcacgaggaacaactacctgcagaccaggaggagggcagc
atggagcaggatttcccagagaacatggatgactttgtgactctggatgagctggcagag
gacgaggacttggagagacaggactcctcatccaaagtaaagtactcctcttcaggaagc
tctaagaaaattgggggtttgagagtggtcaacgttgtgggatttaaacgagcctatggt
ttcctgaacgagatcttggccctggccaaaccctttggtactgtagttcagcacctggtg
cttgacgtgagacctgaggcctttctgcaactcaattcggaagaagaggccaaagcaatg
gtcaatttctacagtgggaatgtaacaccgactgtgtgtgggaagtttgtgaaaatctac
cattcacagacatacgctaccattcagagtgggagagtggtatacgtgggtcagattccc
cacttcaaatcctcagatgcctctcttctgaaaatcgctgaaccgttcggcaaagtgaga
cgctatttcctgaacagatctcgcaacgagtgtttcattgagatggaacgtggagaggac
gctgagagaatgtctgagacctacaaggacacgccccctaaattcgaaggcaagcgacta
acggtgtacgtgagcaggaagtacaaacagctcaaatacggacaccgaccaccagcccct
gactctgaggagaagaagaggtcgtcgaagagggagcgatcgggcagtgaaacgagctcc
cacaggagctccgcagccaaaagctcggccaaacaggatgaagaacctccagtcaagaag
tccagagaggagactgcatcttcatcagcagacgagcctgacaaagaagacgaggaggag
atggtggagacgcccactgagcagagtgaggtagaggttaggaaggaggaggacgaggta
cagggagagcacgagcacggtcaaccctctgagacctcagctgtacacaagattgacact
gacatgaacatcaaaatggaggaaaacgagacggccatttccatagtgagtgtgaggagc
gttgagaatggagagaccggctgcacaccatcccaggctgaggggaagctttcatcaacc
agccaggttcctctggggccgtatgagtctaacaacccagtgggtgttgaatatgtgaag
atggggtactactgtagagtctgtttcctgttctattccaatgaggagacggccaagaag
attcactgcagcagtcaatctcactaccaaaaactcaagaaacatctggaaaaggagaag
gccaaagctcaaagtaccacagggacgaagactcctgtttag
DBGET
integrated database retrieval system