Oncorhynchus keta (chum salmon): 118373712
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Entry
118373712 CDS
T09424
Name
(RefSeq) endothelial PAS domain-containing protein 1-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04140
Autophagy - animal
oke04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118373712
04137 Mitophagy - animal
118373712
04148 Efferocytosis
118373712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118373712
Transcription factors [BR:
oke03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118373712
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_HIF1A
PAS
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
118373712
NCBI-ProteinID:
XP_052348545
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Position
3:complement(19983518..19988838)
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AA seq
392 aa
AA seq
DB search
MTPERERRRIMSCEAARARRRAESQVLIDMSQLLPLPSSLRPQLDKPSIIRLTISYLRIH
TLLSGFADRQTWERRDEEGERETREEGERKMRERREEGARERWAEGNKEAGDREIGERRE
ERKKEMGETDLYLRILGGFVVVVTTEGDMIYLSDNIREYMGLTQVELMGHSIYDFTHPSD
HKEIRDNLDLTAGRSRCGGLRDFLMRMKCTVTHRGRTVNLRSAGWRVLQCRGCLKVCVSG
PSLTCVLFTCQPLSLTHTLLHTHTFTSHHSMDMRFTYCDQRVTGLLSYRPEELLGVSMYD
LCHTLDLHTLTKSHLNLCSKGQSVSGVYRVLVRGGGYMWAETHSAVISKPRPTQPHPSRP
SPPLFVACVTYILSGVEEPTQLLSLGQMNRGE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggagagagagaggaggaggataatgagttgtgaagcagcgagggctaggcgg
agagcagagtctcaggtgttgattgacatgtctcaactcctccccctcccttcctccctc
cgcccacagctagacaaaccctccatcatacgactaaccatcagctacctacgcatacac
acactgctctctggctttgctgaccgacagacgtgggagaggagggacgaggagggagag
agggaaacgagggaggagggagagaggaaaatgagggagaggagggaggagggagcgaga
gagaggtgggcggagggaaataaggaggcgggagacagggaaatcggggagaggagggag
gagcgaaagaaggagatgggggagacagatctatacctgaggattctgggtggctttgtc
gtcgtggtaacgacagaaggagacatgatctacctgtcagataacatcagagaatacatg
ggtttaactcaggtggagttgatggggcatagcatatatgatttcacacacccctctgac
cataaggaaatcagagacaaccttgacctcactgcagggcggagcaggtgtggaggactg
agagactttctgatgaggatgaagtgtacagtgactcacagagggagaactgtcaacctc
agatcagccggctggagggtgctgcagtgtcgagggtgtttgaaggtgtgtgtgtcagga
ccctctcttacttgtgtgctcttcacctgccagcccctgtccctcacacacacactccta
cacacacacaccttcaccagccatcacagcatggacatgaggttcacttactgtgaccaa
agggtgactgggttgttaagttatcgtccagaggagttgctgggtgtctctatgtatgat
ctgtgtcacactctggacttacacactctgaccaaaagccacctgaacctgtgttctaag
ggtcagtcagtgagtggggtgtacagggtgttggttagagggggagggtacatgtgggca
gagactcacagtgctgtcatctccaaaccccgcccaacgcagccacacccatctagaccc
tcaccgccactcttcgtcgcttgtgtcacatacatactcagtggtgttgaagagccaact
cagcttctgtctctgggccagatgaaccgaggggagtaa
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