KEGG   Oncorhynchus keta (chum salmon): 118373847
Entry
118373847         CDS       T09424                                 
Name
(RefSeq) nibrin
  KO
K10867  nibrin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03440  Homologous recombination
oke04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    118373847
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    118373847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oke03032]
    118373847
   03400 DNA repair and recombination proteins [BR:oke03400]
    118373847
DNA replication proteins [BR:oke03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    118373847
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     118373847
    BRCA1-C complex
     118373847
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA Yop-YscD_cpl BRCT RTT107_BRCT_5 PTCB-BRCT
Other DBs
NCBI-GeneID: 118373847
NCBI-ProteinID: XP_052351438
LinkDB
Position
34:81109441..81126937
AA seq 829 aa
MWTLNPLESGGVTHYLLPEKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNDERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLQ
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTEALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMATGNSQALLPHSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQKADSESMRMKPTIPGATLSQNAPVDETVMPAASQNITAYAINTEPS
QGIRGVDVAGVSTVGETPERDQSRTTSHLNRSKPSGRELAGTCTVAETMMSSFSASDSAG
GGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGRVQTMSPQKCSSQKQQVSQKCSPQKQ
SSLTNFFQPVGKKRPREGEESPTVQSEAKFSRREEDMENTKRTVPQHSETSNPTLPPTGR
SQGQHSSGAHLFPGQTEALSEGFSKPAQQGLQSRKRKEMEEETKGSGALEIEMDELESIM
SEDMDESDEPMSASQGQRLKLTDKSSTNRKQLLETVELTSANKKQRIYPVEPIAANHKSG
LDSEERSSASRRQRAEPVAEVKDEEVSFIESKPVNGVTPGHLEEPETDAKPVKQEASGLG
GENLPSRLIVVEFKCLTVATPARPKPRPMETHGNVNRKDFKRFCKVPVPGAQGLPNIIGG
SDLLVHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPIKKR
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccagagaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaatgatgagcgtctgtcaggggacacccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcagcaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcag
cttctgggtggccggctgaccaacacctggacacaagactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgctttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcactgaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagagatagacgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactggcaagaccttcctttttctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatggca
acgggaaactcccaagcactactgccccattccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccctccaatcagaaggctgactcagaatcc
atgagaatgaagcccaccatccctggcgccacgctatcccagaatgcaccagtggacgag
acggtaatgccagcggcatctcagaacatcacagcctatgctataaacacagagccgtca
cagggcatcaggggggtggacgtggctggggtgagcacagttggagagacccccgagagg
gaccagagccggaccacctctcatcttaaccgatccaaaccctcaggccgagagctggcc
gggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagtgctggt
ggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagggaaaggtgat
gctatcaccagattcctggccacagcccctcggaccaatggaagagtgcagacgatgtcc
ccacagaagtgctcctcccagaaacaacaggtctcccagaaatgttccccccagaaacag
tcttccctcactaatttcttccagcctgttggcaagaaaagacctagggaaggcgaggaa
tcccctactgtccaatcagaggccaagttctccaggagggaagaagacatggagaatacg
aagaggacagtaccacagcactcggagacctccaaccccaccctcccccccacaggcagg
tcccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctgtca
gaggggttctccaaacctgcccagcaggggctccaatccaggaagaggaaggagatggag
gaggagactaaagggagtggggctttagagatagagatggacgaactggagtccatcatg
tctgaggacatggacgaatcggatgagcccatgtcagccagtcaaggccagcggttgaag
ctgacagacaagagctcaaccaatagaaaacagctcctggagacagtggaacttacctct
gccaataagaaacagcggatttatccagtggaaccaatcgcagccaatcataagtcaggc
ttggattcagaagagcgatcatcagccagcagacgacagcgagcggagcctgtagctgag
gtcaaagacgaagaggtgtctttcattgagtcaaaaccagttaatggtgtgacccctggt
catctggaagagccagagactgatgccaaacctgtcaaacaggaagcctcaggtttaggg
ggtgagaatctccccagcagacttatagtggtggagttcaaatgcctcaccgtggcaaca
ccggcaagacctaaaccacgccccatggagacgcacggcaatgtcaacaggaaggacttt
aaacgcttctgcaaggtcccagttcccggtgcccagggtttgcccaacatcatcggcggg
tcagacctgttggtccacaaccgaggcaagaactctgagctggaggagtggctgagagac
gcagcagaggatgagcgtcagaacaagaaagaggagactttgggagatgaccttttcagg
tacaaccccaaacccatcaagaaaagatga

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