Oncorhynchus keta (chum salmon): 118373847
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Entry
118373847 CDS
T09424
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03440
Homologous recombination
oke04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118373847
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118373847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118373847
03400 DNA repair and recombination proteins [BR:
oke03400
]
118373847
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
118373847
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
118373847
BRCA1-C complex
118373847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
118373847
NCBI-ProteinID:
XP_052351438
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All DBs
Position
34:81109441..81126937
Genome browser
AA seq
829 aa
AA seq
DB search
MWTLNPLESGGVTHYLLPEKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNDERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLQ
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTEALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMATGNSQALLPHSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQKADSESMRMKPTIPGATLSQNAPVDETVMPAASQNITAYAINTEPS
QGIRGVDVAGVSTVGETPERDQSRTTSHLNRSKPSGRELAGTCTVAETMMSSFSASDSAG
GGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGRVQTMSPQKCSSQKQQVSQKCSPQKQ
SSLTNFFQPVGKKRPREGEESPTVQSEAKFSRREEDMENTKRTVPQHSETSNPTLPPTGR
SQGQHSSGAHLFPGQTEALSEGFSKPAQQGLQSRKRKEMEEETKGSGALEIEMDELESIM
SEDMDESDEPMSASQGQRLKLTDKSSTNRKQLLETVELTSANKKQRIYPVEPIAANHKSG
LDSEERSSASRRQRAEPVAEVKDEEVSFIESKPVNGVTPGHLEEPETDAKPVKQEASGLG
GENLPSRLIVVEFKCLTVATPARPKPRPMETHGNVNRKDFKRFCKVPVPGAQGLPNIIGG
SDLLVHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPIKKR
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccagagaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaatgatgagcgtctgtcaggggacacccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcagcaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcag
cttctgggtggccggctgaccaacacctggacacaagactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgctttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcactgaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagagatagacgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactggcaagaccttcctttttctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatggca
acgggaaactcccaagcactactgccccattccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccctccaatcagaaggctgactcagaatcc
atgagaatgaagcccaccatccctggcgccacgctatcccagaatgcaccagtggacgag
acggtaatgccagcggcatctcagaacatcacagcctatgctataaacacagagccgtca
cagggcatcaggggggtggacgtggctggggtgagcacagttggagagacccccgagagg
gaccagagccggaccacctctcatcttaaccgatccaaaccctcaggccgagagctggcc
gggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagtgctggt
ggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagggaaaggtgat
gctatcaccagattcctggccacagcccctcggaccaatggaagagtgcagacgatgtcc
ccacagaagtgctcctcccagaaacaacaggtctcccagaaatgttccccccagaaacag
tcttccctcactaatttcttccagcctgttggcaagaaaagacctagggaaggcgaggaa
tcccctactgtccaatcagaggccaagttctccaggagggaagaagacatggagaatacg
aagaggacagtaccacagcactcggagacctccaaccccaccctcccccccacaggcagg
tcccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctgtca
gaggggttctccaaacctgcccagcaggggctccaatccaggaagaggaaggagatggag
gaggagactaaagggagtggggctttagagatagagatggacgaactggagtccatcatg
tctgaggacatggacgaatcggatgagcccatgtcagccagtcaaggccagcggttgaag
ctgacagacaagagctcaaccaatagaaaacagctcctggagacagtggaacttacctct
gccaataagaaacagcggatttatccagtggaaccaatcgcagccaatcataagtcaggc
ttggattcagaagagcgatcatcagccagcagacgacagcgagcggagcctgtagctgag
gtcaaagacgaagaggtgtctttcattgagtcaaaaccagttaatggtgtgacccctggt
catctggaagagccagagactgatgccaaacctgtcaaacaggaagcctcaggtttaggg
ggtgagaatctccccagcagacttatagtggtggagttcaaatgcctcaccgtggcaaca
ccggcaagacctaaaccacgccccatggagacgcacggcaatgtcaacaggaaggacttt
aaacgcttctgcaaggtcccagttcccggtgcccagggtttgcccaacatcatcggcggg
tcagacctgttggtccacaaccgaggcaagaactctgagctggaggagtggctgagagac
gcagcagaggatgagcgtcagaacaagaaagaggagactttgggagatgaccttttcagg
tacaaccccaaacccatcaagaaaagatga
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integrated database retrieval system