Oncorhynchus keta (chum salmon): 118373911
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Entry
118373911 CDS
T09424
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X8
KO
K16499
protocadherin delta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118373911 (pcdh19)
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118373911 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
ResB
Motif
Other DBs
NCBI-GeneID:
118373911
NCBI-ProteinID:
XP_035616094
EnsemblRapid:
ENSOKEG00005001882
LinkDB
All DBs
Position
4:62351040..62457417
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AA seq
910 aa
AA seq
DB search
MYAKDMDFMQILWIVLLCWTGSDSVINLKYSINEEQKAGYIIGNVTKDAQTQGFAIAPRA
PYLRVISNSEPRWVELSPAGLLLTHQKIDRDVACRQTSKCTVSLEVMSNSMEICVIKVEI
VDLNDNAPRFPTNHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNIKVMDSNDNNPVFD
QPVYTVNVMENYPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGPLDYEATHIYEIDVQAKDLGPNSIPAHCKVTVNVMDANDNPPVISLLSVNTELIEVS
ENAPRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQRDTY
NLTIQAEDSGTPPLRATKSFVVKVTDENDNPPHFLKPHYQEMVLENNLPGSCLLAVSAVD
PDLGMNGTVSYTIVPSEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDQGN
PSLSTNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPRNAGVGYLVTQVKADDYDEGEN
GRLTYTISEGDRPFFEIDQVNGEVRSTKMFGEQVKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGSQKKSSKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSLP
LGCRRSESTFLNVENQNSRNAAPNHGGYQQHPFASGQGPQQPDLIINGMPLPETENYIDS
SYVNSRAHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYIDTAVNDVLNMTVP
PNVCQLPDQE
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccaaggacatggattttatgcaaattctttggatagtccttttatgctggact
gggtctgattctgttatcaatttgaaatactcgataaacgaggagcagaaggctgggtat
atcattggaaacgtgacaaaggacgcacaaactcaaggatttgccattgcaccgcgtgcg
ccgtacttgcgggtcatctcaaattcagagccgcgatgggtggaactcagccctgctgga
cttctcctcacacatcagaaaatagaccgagatgtggcttgccgacagacgtcaaagtgc
actgtctctctggaggtgatgtcaaactccatggagatctgtgtgattaaagttgaaatt
gtggatttgaacgataatgcgcccaggttccccacaaaccacattgacattgaaatctca
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactctggg
attttcggtgtgcaatcatattcgatcaccccgaatgagctcttcgggttggagattaag
actaggggggacgggtccaagattgccgaactcgtagtgcaaaaatcgttagatagggag
acccagtctcactactcatacgaaatcagtgcagaagacggtggagaccccccaaagatt
ggcgcagttcagctcaatattaaagtaatggattcgaatgataataatcccgtttttgac
cagcctgtgtatacagtgaatgtgatggagaattatcctattaatacacttgtaattgat
ttgaatgcaacggatcctgacgagggaactaatggtgaggttgtatactcgtttaacagt
tacgtcaccgagaaaactagagatgtatttaaaatcgaccctagaaccggtattatcact
gtaaatggcccgttggattatgaagcaacccatatttacgagattgatgtccaagccaaa
gatttaggtccaaattctattccggctcattgtaaagttacggtcaatgtgatggatgca
aatgataacccacctgtcattagtttattgtcggtgaatacagagctgattgaagttagt
gagaacgcgccacgtggatacgttattgcattagtaagggtctcagataaggacgctggc
gcgaatggcaaggtgcagtgtagactacaaggcaacgtccctttcaggctccaggaatac
gagagcttctcaaccatccttgtcgatggcaggctagacagagaacagagggacacatac
aatctaactatccaagcagaggacagtggcaccccccctttacgtgccactaaatcgttt
gtagtgaaagtcacagatgaaaatgataaccccccccacttcctaaaaccccattaccaa
gagatggttctagaaaataacctgcccggctcatgtttgctggcagtgtctgctgtagat
cccgatttgggcatgaatggcaccgtttcatacaccatcgttcccagtgagattaaacac
atggacgtaaacacatatgtcagtataaatccttcaggacgtatttactccatgagatca
ttcgaccatgagtacactaggacttttgacttcaaagttttggccagggaccaagggaat
ccgtccttatccactaacgcgacggtgcgcattgttgttttggatgtgaatgacaataca
cctgttatgactactccacccctggtaaatggcaccgcggaagtatccattccaaggaac
gcaggggtgggttacctggtgacccaagtcaaggccgacgactacgacgagggggagaat
ggaaggctgacctataccatttcggagggagacaggcctttctttgagatagaccaggtg
aatggagaggtgcggtccaccaagatgttcggggagcaggtcaagtcgacctacgagatc
acagtggtggcacgcgaccacgggaaaccgtccttgtcggcctctgcatacattgttgtc
tacctctcaccagacctgaacgcccaggaatctattggaccagtaaacctgtcattgatt
ttcatcattgccctgggctctattgcagctatcctgtttgtcactatgatttttgtggca
gtcaagtgcaaaagggataacaaggagatccgaacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcgtatggcagccagaagaagtcgagcaagaagaagctgagc
aagaacgacatccgcctcgtgccgcgcgacgtggaggagacggacaagatgaacgtggtg
agttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctgccg
ctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcgcgcaat
gccgcgcccaaccacggtggctatcagcagcatcccttcgccagcgggcagggtccccag
cagcctgacctcatcatcaacggcatgccgctgccagagacggagaactatatcgactcc
agctacgtaaacagccgagcacaccttatcaaaagcacatcgacattcaaggacctggag
ggcaatagtctgaaggacagcgggcacgaggagagcgaccagacggacagtgagcacgac
gtccagagaggccactacatagacactgctgtcaacgatgtgctcaatatgaccgtgccc
cccaacgtctgccagctgcccgaccaagaataa
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