Oncorhynchus keta (chum salmon): 118373926
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Entry
118373926 CDS
T09424
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118373926
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
L1 family
118373926
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
118373926
NCBI-ProteinID:
XP_035616130
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Position
10:complement(19000957..19104286)
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AA seq
1175 aa
AA seq
DB search
MRMRSSRWSPGLSLLVGVVASICAFHPTTAIDIPLEVVGHVNIEQLPTITEASPSSLIAF
PFDESFPMTCEAKGNPKPEFWWTKNGEEFDPYQDPRLIKEKNSGTFVIPNTGNLTEYQGT
YRCYASNKLGTAITEEVEFVVPHVPKFPKEKIDPIEVEEGQPVILECNPPKGIPPLQIYW
MTIGLQHIEQDDRVSMGLNGDLFFSNALEKDSHRDYCCFAAFPKIRTIVQKNAMSVIVKS
KNSNNDSSSGPGHANSIMERKPSLLMPSGVKSETQLVKGDELLLECIAEGFPTPMIEWLK
IDHMLPDRVTIENHGKLLSIDQVDEDDNGKYMCKATNIHGMAVHYFDVSVEEPPQWVSEP
ESQLRMIGSDVLINCSATGTPQPTIQWMVNGKPIEEVPASNRKEFDGKIVLHKANSTDSA
VYQCEASNRHGTLLANVNIMIMNLPPMILTEEGLEYSAVEGKVIVMHCKVFSSPPSAVTW
NKEDSPGSSEGPRFTVHQNGSLEIYNVEKEDMGQYTCYTKNTEGTSAITALLDVKEPTKI
FQAPEDLQVLIGTTAQLSCLAVYDNSFSGDFEIVWEKDDVEIALNHTENSGYFVEDGILQ
IVNVSHRDQGMYKCVASTPMDQDTASALLMVLDIPHAPENLVLSEHKGRSVKLKWIPGED
HNSSTTEFIIEYEESQWEPGTWRELQRVPGNHGSAVLKLYGHVNYRFRVSGVNTVGRGRP
SEPTERYKTPPAAPDKNPENIKIEGHLPHEMDINWEPLSPIEHNGPGLEYKVSYKRQHVE
EDWQEHVVKRHSFVVKDTPTFVPYEIRIQARNHHGWGPEPKVVTGYSGEDFPSAAPDDVA
VEVMNNSLVKVSWMRVHKDKLHGHLGGYRISWWRLRSLLDSKKTHGDKHTLTFPGDRNHA
MVPGLTPFSEYSLIIMTFNRRGNGPGSHAVNFKTPEGVPEKTPVFRVTDVQKHTVTLTWA
PPLEANGVLTGYLLEYQLINDTEEVGVLQTVDISNPDTTMWVLQNLEAISRYKFYLRPCT
RVGCGPRVIKESTTTPEARLASIHGGISTQGWFIGLMCVSALLTLMVLIACFVNRNKGGK
YSVKEKEDLHPDLESQGIHDDTFCEYSDNDEKPLKGSQHSLSGQIKAEDSGDSLVDYGDE
DIQFNEDGSFIGEYAGRKEKKVSMEVKGTTNQSTA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaggtcgtcgaggtggagcccaggattgtctctcctggtcggtgtggtcgcc
agtatctgtgcctttcaccccaccactgccatagacataccattggaggttgtaggtcat
gtaaacattgagcagctgcccaccatcacagaggcgtcccccagctctctgatcgccttc
cccttcgatgagagcttccccatgacgtgtgaagccaaagggaaccccaagccagaattc
tggtggacgaaaaatggggaagagtttgacccctaccaggacccaaggctgatcaaggag
aaaaactcggggacgtttgtgatccccaacactgggaacctcacagagtaccagggaact
taccgctgttatgcctcgaataaactagggacagccataacagaggaggttgagtttgtt
gtgccccatgtaccgaagtttcctaaggagaagattgatcccattgaggtggaggagggt
cagcctgtcattctggagtgtaaccctcctaaaggaatccctcctttacagatctattgg
atgaccatcggccttcagcacatagagcaggatgacagggtgtccatgggtctgaatggc
gacctgttcttctctaatgctctggagaaggacagccacagagactactgctgcttcgct
gcctttcccaagatacgcaccatcgtacagaagaatgccatgtctgtcatagtcaagagc
aaaaattcaaacaatgactcaagtagcggtccaggtcatgccaattcaatcatggagaga
aaaccaagtcttctgatgccctctggtgtcaagtcggagacacagctggtgaaaggtgat
gaattactactggagtgcattgcagagggctttccaactcccatgattgagtggttgaag
atagaccacatgctgcctgacagagtaacaatagagaaccatgggaaactcctgagcatt
gaccaggttgatgaagatgacaatgggaagtacatgtgtaaggctacgaacatccatgga
atggccgtccactactttgacgtatcagtggaagagcctcctcagtgggtgtctgagcct
gagagccagcttaggatgattggctcagatgtgctcatcaattgctccgccacgggcact
cctcagcccaccatccaatggatggtgaatggaaagcctattgaggaggtcccagcatct
aacagaaaagagtttgatggaaaaattgtcttgcacaaagccaactcgactgatagtgcc
gtctaccaatgtgaggcctccaacagacatggaaccctgctagccaatgtcaatatcatg
atcatgaatctgcctcctatgatcctgacagaggaaggtctggagtattcagcggtggag
gggaaggttatagtgatgcactgcaaggtgttcagttctccaccatctgctgttacctgg
aacaaggaggactccccaggatcttcggagggtccaaggtttacagttcaccagaatgga
tcattggagatctataatgtggaaaaagaggacatgggccaatacacatgttacaccaag
aatactgaagggacgtctgctatcactgccttactggatgttaaagaacccacaaagata
ttccaggccccggaagacttgcaggtcctaataggaaccacagcccagctctcctgcctg
gcggtgtacgacaactcattcagtggcgactttgagattgtgtgggaaaaagacgatgtg
gagatagcactaaaccacacagagaattctggatatttcgtagaggatggtatcctgcag
attgtcaacgtcagccacagagaccagggcatgtacaagtgtgtggccagtactccaatg
gatcaggacactgcctctgcactactcatggtgctggacatcccacatgcacctgagaac
ttggtgctatctgaacacaagggcagaagtgtgaagctcaaatggatccctggggaggac
cacaacagctcaaccactgagttcattattgagtatgaggagagccagtgggagccgggg
acctggagagagcttcagagagttcctggaaatcacggctcggcagtcctcaaactttac
ggacatgtcaactatcgcttccgagtgtctggagtcaacacagtgggcagagggcgcccc
agtgagcccacagagagatacaagacccctcccgcagcccctgacaagaaccctgaaaat
atcaaaattgaaggtcatttgccacatgaaatggatatcaactgggagccattgtccccc
attgaacacaatgggccaggccttgaatataaggtgagttataagagacagcatgtggag
gaggactggcaagagcatgtggtgaagagacactcgtttgtagtgaaggacactcccacg
tttgtgccatatgagatcaggatccaggcaaggaaccaccacggatggggacctgaaccc
aaagtggtgacgggctactctggagaagacttcccctctgcggctcctgatgatgtagcg
gtggaggtgatgaacaactcgctggtcaaggtcagctggatgcgtgttcacaaggacaag
ctgcatggacatctgggaggctacaggataagctggtggcggctgcgtagtctgctggac
tcaaagaagactcacggggacaaacacactctgacattcccgggggaccggaaccatgcc
atggtaccagggctcacgcccttctctgagtacagcctcatcatcatgaccttcaacagg
cgaggcaatgggccaggtagccacgccgtcaacttcaaaaccccagagggagttccagag
aaaacccccgttttcagggtcacagatgttcagaagcacactgtcactctcacctgggca
cctcctctggaagccaacggagtccttacaggatacctgctagagtatcagctgatcaac
gacacagaggaggtgggtgtcctgcagactgtggatatcagcaaccctgacaccaccatg
tgggtcctgcagaacctggaggctatcagcagatacaagttctacctgcgcccctgcacc
agggtgggctgtgggccccgggtcatcaaggagagcaccaccacacctgaagcacgtctg
gcaagcatccatggaggaatctctacccagggctggttcatcggactgatgtgtgtctcg
gctctcctaacactcatggtgttaatcgcctgctttgtcaacagaaataaaggagggaaa
tattccgtaaaggagaaagaggatcttcatccagacctagagtcccagggtatccatgat
gacaccttctgtgaatacagtgacaatgatgagaagccactgaagggcagccagcactct
ctgagcggacagatcaaagcagaggacagtggggacagcctggtggactatggggatgag
gacatccagttcaacgaagatggctccttcatcggcgagtacgcaggtcgcaaagaaaag
aaggtgtccatggaagtcaaaggaaccacgaatcagagcacagcgtga
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