Oncorhynchus keta (chum salmon): 118374171
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Entry
118374171 CDS
T09424
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118374171
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118374171
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Fes1
Motif
Other DBs
NCBI-GeneID:
118374171
NCBI-ProteinID:
XP_052322611
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Position
17:55837097..55893977
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AA seq
806 aa
AA seq
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MELKAVGWNFKMPSAMNGNRTVQSASPDVGSAPGQITLGGGQSSGAQTEAMKQVLGVVDK
KVRNMEKKKGKLDDYQSKKNKGERLNQDQLDALTKYQEVTNNLEFARELQKSFLSLGQDI
QKAVKKAARREQLQREESEQKRLKTVLELQFLLDRLGEDSVRQELRQGAASVDTPSLLTD
TELTALDELYKLVGPEPDQNTRFTDQYEEASQHLMDLLEGKDKAVAGTTYKALKDSLNRV
LLSGYFDQAQSHQNGVCEESEEQAVALVEETEEKAVVEETEEKAVVEETEEKAVDPEGEI
VEEYIEPIEVEATEFVNRQFILDTTYSDKEQGDEWTTETEVVSTILQQPVQSAPPPITTE
AQSLNRTTPPGTPPADPVVRKQEVQNLLSQMQGPYNFMQDSMLEFDGQPIDPAIVSAQPI
DPAIVSAQPIDPAIVSAQLIDPAIVSAQLIDPAIVSAQPIDPAIVSAQPIDPAILSAQLI
DPAIVSAQPIDPAIVSAQPIDPAIVSAQPMKLPTQNIDLPQMGCPPAHPESCFSPHTVSV
QPEATQVPMVSPTPEVYSTPPPMFHSSHAAESRPQTESIDTIQVSLSSEQPPASSSQTQV
FQSVNGPKPPRSSGINVNAAPFRSMQTVFNLNAPVPPANETEALTQASQYQNSYSQQGFS
SQSQQTDMQTEQLQSVVSAFHSQDLSLPSQDLSQRQQLSQQGTGFGPGASHQAFYNSRGM
TRGGPRNANGYRGCDSYQSAFTNTPNSGYQQAQFNTPRDYSNGGNYQRGDGYNQVDREML
NQNYKRGAGQGPRGVSRGGNAQAIRS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaaggctgttgggtggaatttcaagatgccctcagcaatgaatggtaacagg
acagtgcagtcggccagcccagatgtgggatctgctcctggacagatcaccttgggcgga
ggacagtcctctggggcccagaccgaggcaatgaagcaagtcctgggcgtcgtcgacaag
aaagtccggaacatggagaagaaaaagggcaagctggacgattatcaatcgaagaagaat
aaaggggaacgtctcaaccaggaccaactggatgccctgaccaagtaccaggaagtgact
aataacctggagtttgccagggagttacagaagagcttcctgtccctgggacaagatatc
cagaaggcggtgaagaaggcagcgcgacgggaacagctccagagagaagagtctgagcag
aagaggctgaagactgtgctagagctccagtttctcctggacaggcttggagaggacagt
gtgaggcaggagctgagacagggggctgccagtgttgacacaccctcactcctcaccgac
acggagctcactgccctggacgagctctataaactagtgggaccagaaccagatcaaaac
accagatttactgaccagtacgaggaggcttctcaacacctcatggatctgttggagggg
aaggacaaagcagtggcaggaactacgtacaaagctctgaaggacagcctgaaccgagtg
ctgctaagtgggtactttgaccaagcccagtctcaccagaatggagtgtgtgaggagagc
gaggagcaggccgtcgctctagtggaggagaccgaggagaaggccgtagtggaggagacc
gaggagaaggccgtagtggaggagaccgaggagaaggccgtcgacccagagggcgaaata
gttgaagagtacatagagcccattgaggtggaagctacagagttcgttaacagacaattc
attctagacaccacatacagcgacaaggagcaaggagatgagtggaccactgaaacggag
gtggtgagtaccatcctgcaacagcctgtacagtcagcccctccccctatcaccacagag
gcccaatccctgaacaggaccacgcccccaggcacaccccctgcagacccggtggtcagg
aagcaggaggtccagaacctcttgtcacagatgcagggcccttacaacttcatgcaggac
tcaatgctggagtttgatgggcagcccatcgacccagccatcgtatcggcccagcccatc
gacccggccatcgtatcggcccagcccatcgaccctgccatcgtatcggcccagctcatc
gaccctgccatcgtatcggcccagctcatcgacccggccatcgtatcggcccagcccatc
gacccagccatcgtatcggcccagcccatcgacccagccatcttatcggcccagctcatc
gacccagccatcgtatcggcccagcccattgacccggccatcgtttcggcccagcccatc
gacccggccatcgtatcagcccagcccatgaagcttccaacacagaacatagacctgcct
cagatgggctgtcccccagcccacccagaatcctgcttctcaccacacactgtttctgta
cagcctgaggccacacaagtccccatggtgtcccccacgcccgaggtctactccacgccg
cctcccatgttccactcgtcacacgcggcagaatcccgaccgcagaccgagtccatcgac
accatccaggtgtccctgtcgtcagagcagccccctgcctcctcctctcagacccaggtc
ttccagtctgtcaacggccccaaacccccacgcagctccggcatcaatgtcaacgcagca
ccattcaggtccatgcagacagtattcaacctcaacgcccctgtcccgccagccaatgag
acggaagccttgacccaggccagccaataccagaacagctacagccaacagggcttcagc
agccaatcacagcagacggatatgcagacagaacagctgcagtctgtggttagtgccttc
cactcccaggacctatccctgcccagccaggacttgtcccagaggcagcagctcagccag
cagggtacagggtttggccctggggccagtcaccaggctttctacaacagccgaggcatg
acccgcggagggccacgtaatgccaacggctacagagggtgtgacagttaccagtctgcc
ttcaccaacactcctaactctggataccaacaggcccagttcaacacacctcgggactac
tccaacgggggcaactaccaacggggggacggttataatcaggtagaccgtgaaatgctg
aatcagaactacaaacgtggtgcgggtcagggacccagaggtgtgtctcgaggaggcaat
gcccaggccatcaggtcctga
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