KEGG   Oncorhynchus keta (chum salmon): 118374192
Entry
118374192         CDS       T09424                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04145  Phagosome
oke04210  Apoptosis
oke04530  Tight junction
oke04540  Gap junction
oke04814  Motor proteins
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118374192
  09143 Cell growth and death
   04210 Apoptosis
    118374192
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118374192
   04540 Gap junction
    118374192
  09142 Cell motility
   04814 Motor proteins
    118374192
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118374192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118374192
   03036 Chromosome and associated proteins [BR:oke03036]
    118374192
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oke04812]
    118374192
   04147 Exosome [BR:oke04147]
    118374192
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     118374192
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     118374192
Cytoskeleton proteins [BR:oke04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    118374192
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118374192
  Exosomal proteins of other body fluids (saliva and urine)
   118374192
  Exosomal proteins of colorectal cancer cells
   118374192
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 118374192
NCBI-ProteinID: XP_035616462
LinkDB
Position
7:50512474..50517038
AA seq 450 aa
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTRGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttccatgcatgtgggccaagccggagtccagatgggtaatgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
actcgtggaggtggagacgactctttcaacaccttcttcagtgagaccggagctggaaag
catgtcccccgtgccatcttcgttgatctggagcccactgtcatcgatgaggtgaggaca
ggtatttatcgtcagttgttccaccctgagcagctgatcactggtaaggaagatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacattgtgctggac
aggacacgcaaactggctgaccagtgtacaggtctccaggggttcctcatcttccacagc
ttcggaggaggcaccggttctggtttcacctccctgctgatggaacgtctgtctgtcgac
tacggaaagaagtctaagcttgagtttgccgtttacccagctccccaggtgtccacggct
gtggtggagccctacaactccatcctgaccactcacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgtaggaaccttgacattgag
cgtccctcgtacaccaacctcaacaggctcattggtcagatcgtctcctccatcactgcc
tccctgcgtttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacatatgccccagtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgcttcgagccggccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccatcaaaaccaagaggagc
atccagtttgtggactggtgtcccactggcttcaaggtgggtatcaactaccagccccct
acggtggttcctggaggagacctggccaaggtccagagggctgtgtgcatgctgagtaac
accacagccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtatgcc
aagagagcctttgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggattatgaagaggtgggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa

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