Oncorhynchus keta (chum salmon): 118374209
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Entry
118374209 CDS
T09424
Symbol
dync2i1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118374209 (dync2i1)
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
Dynein and associated proteins
118374209 (dync2i1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
118374209
NCBI-ProteinID:
XP_035616485
LinkDB
All DBs
Position
4:34103215..34122801
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AA seq
1091 aa
AA seq
DB search
MPTDKKITKEDTWKSDDLRRHIRGGGHDEESSSSRRRDDERRHRTGESVERRHRDPEREA
RREREKNRERDGTRERTKPRDTDKDRHQDRRIYGSRDRMGEKEERDKERSRAQDRVIKGT
ENVKYRNGDRDSRDKMHDREEKENRDRERVKARERDTERTRERERDALKKSDRDKEKEKN
KESETGERDRERRSDRDRKRNEERAEGGRDRDREHDREKRDRHKEREYLKESEHYKDRSQ
KDKERKERHTDKEHSGQKEEREYREQHRKEKEERERRHKERAQHDTGERRRHDGDSREVE
SERVHRERKGSDREMEGKRDKHRERRHREEAIPERDSTERTSAKKSSSSSSDLRVHKDKK
ETVKTKEVVMRSESAWRSSQKQLSDTEEPVEIAEAPAEDRGYDEAQDYEEDFEDYEEDFE
DVDDSEGEDEKQTRSHEEREAREEISSQRREEIEAIQRAMDEENERVQPRLSTEEDDRPK
RSRDSETPQSKVSQPGRFMDFVAAKHREVSKKVASKQKKRSTELLRLIDLDYSITFSLLD
LPPVNEYDMYIKNFGTTNTKQAYVQCNEDNTDRDIQTEEIEMSEKWTQHPAERNVGCGGP
KLSHEASDESVTKLSIDSQRLATFLRSASQVVAVLLEEDRAEKQSLKKLRTQADTLSFSD
GCLQLNTKLPFLYGRQISLVQFSQVQRQTMLSVHNPSAKPSAVRLDSKTIICIWNIWEPS
RPQKILVYESEVQCCCFSPGKATLVFAGTSVGSVVLWDLREHASAHYTLRIGENDWTLRH
PTFSTDAVLAASGHMSSVSSVEAVPATVAEGLRPELPLLASDEESSGLSFQLASLDGNGV
LNLWVVLELPKANDAGSHTDLGLRPGGKVKLLHSSTVLTTSERSLTRDAKKTTPLQTLLL
KFLPSDSNHFFIGTNMGLVNHGTSHGLKAPPKFYRPQVVGFRPVDVASIDFSPFGEPIFL
VGCGDGSVRLHTVLSEQPLMEWTSSTAGQPVVSVQWAQTRPTVFCVLDAASYLHIWDLLE
KDFEPVITEKIDADRVTAMAVFGDPAKQNTYSGISLATQSGKIEMQYFSKRLTVPESADL
EKLQIMMQEAF
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagataagaaaataacaaaggaagatacatggaaatcagatgaccttaggagg
cacataaggggtggaggacacgatgaagaatctagcagcagcaggaggagagatgatgag
agaagacataggacgggggagtcagtcgagcgacgccacagagacccagagagggaggcc
agaagggagagagagaagaacagagagagagatgggacccgagagagaacaaaacccaga
gatacagacaaggacaggcatcaagacagaaggatatacggctcgagagacaggatgggc
gaaaaggaggagagagacaaagaaaggagcagagcgcaagatagggttattaaaggcaca
gagaatgttaagtacaggaatggggacagagacagtcgggacaaaatgcatgatagagaa
gaaaaagaaaacagggatagggaaagggtaaaggccagagaaagggatacggagaggaca
agggagagggaaagagatgcgctgaagaagagcgacagggataaagagaaggagaaaaac
aaggagagtgaaacaggggagagggacagggagcgaaggtctgacagagatagaaagaga
aatgaggagagggcggagggagggagagacagggatagagagcatgatcgtgagaagaga
gatagacataaggagagggagtatctgaaagagagtgaacactacaaggacagatcgcag
aaagacaaggaaagaaaagaaagacacacggacaaagagcattcaggacaaaaggaagaa
agagaatacagggagcaacatagaaaagaaaaggaggagagagaaaggagacacaaagag
agagcacaacacgatacaggtgaaagacggagacatgacggtgattccagagaagtggag
agtgagcgagtgcacagggaacgaaagggatcggacagagagatggagggaaagagggat
aaacatagagagaggaggcacagagaagaagcaattcctgagagggattccactgaacgg
accagcgccaagaaatcatcatcatcatcctcagacctcagagttcacaaggataagaaa
gagactgttaaaactaaggaagtagtgatgcgatctgagtcagcgtggaggtctagtcag
aaacaattaagtgacacagaggagcccgtggaaatcgcggaggccccagctgaggaccgt
ggctatgatgaagctcaggactatgaagaggactttgaggattatgaggaggattttgag
gatgtggatgacagcgagggagaggatgaaaagcagacacgcagccatgaagagagagaa
gcgagggaggaaattagttcacagaggagggaggagatcgaggccattcagagagccatg
gatgaggagaacgagagagtccagcccaggctaagcacagaggaggacgacagacccaaa
aggtcaagagattctgaaacgcctcaaagtaaagtttcacagcccgggaggttcatggac
tttgtcgctgcgaagcatcgtgaggtcagcaaaaaggttgccagcaaacagaagaaacgc
agtacagagctgcttcgcctgatcgacctggactactccatcaccttctccctcctggat
ctgccccctgtcaatgaatatgacatgtacatcaaaaactttggaacaacaaacacaaaa
caggcttacgtccagtgcaacgaggacaatactgatcgcgacattcaaacggaggagatc
gagatgagcgagaagtggacacagcatcctgcggagaggaacgtaggctgtggaggtcct
aaactttcccacgaggcgtctgatgaatctgtgaccaaactgagcatcgattcacagcgc
ctagcaacatttctgcgctcagcttcacaggtggttgcggtactgttggaagaggatagg
gctgagaagcaatcactgaagaagctgaggactcaagcagacactctctctttcagcgac
gggtgtttacagctcaataccaagcttccatttctatatggtcgtcagatcagcctggtt
caattctcccaggtgcagaggcagaccatgctgtccgtgcacaacccctcagccaagccc
agcgccgtgcggctcgatagcaagaccatcatctgtatctggaacatctgggagccctcc
cgcccacagaagattcttgtctacgagtccgaggtgcaatgctgctgcttcagccctggt
aaagccacgctggtgtttgcgggcacgtccgtgggttctgtagtcttgtgggacttgagg
gagcacgccagtgcccattacactttaagaataggggagaacgactggactctccgccac
ccaaccttctccacagatgccgtgctggcagcgtcgggccacatgtcctcagtgagctct
gtggaggccgtccctgccaccgtggctgagggcctgaggccagagcttccccttttggct
tctgacgaagagtcatcaggattgtcattccagttggcttctcttgatggaaatggggtt
ctgaatctatgggtggtactggagctccctaaagccaacgacgccggctcgcacacagac
ctggggctccggcctgggggcaaagtgaaactgctccacagctccacagtcctcaccacc
agcgagaggtctttgacgcgagacgctaagaaaacaacaccgttacagacactgctgtta
aaatttctgccttctgattccaaccattttttcattggcacaaatatgggtcttgtgaac
catgggaccagtcacgggttaaaggctcctccaaagttctacaggcctcaggtggttgga
ttcagacccgttgatgtcgcctccatcgacttttctcccttcggagaacccatattcctg
gtgggctgtggggatggcagtgtcagactacacacagtgctgagtgagcagcctctgatg
gagtggaccagcagtacagcagggcagccggtggtgtcagtacagtgggcccagaccagg
ccaacagtcttctgtgttctggatgctgcctcctaccttcacatatgggacctgctggag
aaagactttgagcctgtgatcactgaaaagattgatgctgacagggtaacagccatggct
gtttttggtgaccctgcaaagcagaacacctattcaggaatatcactggcaacacagtcg
gggaagatagaaatgcagtatttcagcaagagattgacagtgcctgaatctgctgacctg
gagaaactacagatcatgatgcaggaggccttttga
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integrated database retrieval system
