Oncorhynchus keta (chum salmon): 118374283
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Entry
118374283 CDS
T09424
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118374283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118374283
Transporters [BR:
oke02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118374283
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
118374283
NCBI-ProteinID:
XP_052380403
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Position
1:complement(39790364..39818229)
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AA seq
644 aa
AA seq
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MEMKQSMMMDRENEGGEKEKGEESSQENGRLMLADGGVAEKGDPKVNSGGGSGGVSNGYP
TSTAPSPKEGAGGVPAGALRTLVVHQTSLDQPRETWSKKMDFLLSVIGYAVDLGNVWRFP
YICYQNGGGAFLLPYMLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAIC
IIALYIAFYYNTIMAWALYYLLASFRPSLPWTTCSNPWNTVNCLRYLSTDSNVTWTNTST
SPAEEFYTRQVLQVHLSPGLHQLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTA
TFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWGKLLSTTVWIDAAAQIFFSLGPGFGVLL
AFASYNPFHNNCYKDALLTSSVNCLTSFLSGFVIFTVLGYMAEMRKIGVETVAKDAGPSL
LFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPQLLSRRREWF
VLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGMSRFCADV
HMMLGFSPGLFWRVCWVAICPIFLLFIIVSFLAFPPEVKLFDYVYPPWTTVLGYCIGVSS
FICVPAYMLYHLLTAKGTFKQRLLKGITPVPSGPHSDIIITHAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacagtcaatgatgatggacagagagaacgaaggaggggagaaagagaaa
ggggaggagtcatcgcaggagaacggcagactcatgctggctgacggaggggtggcagag
aagggggaccccaaagtgaactctggtggggggtcaggaggggtgtccaacgggtacccc
acgtccacagcaccgagccccaaggagggagcggggggtgtacccgcaggggccctcagg
actctggtggtccaccagaccagtctggaccagccccgggagacctggagcaagaagatg
gactttctgttgtctgtgattggctacgccgtggacctgggaaatgtgtggcgcttcccc
tacatctgctaccaaaacggcggaggtgccttcctgctgccctacatgttgatggcggta
ttcggtggcgtgcctctgttctacatggagctggctctggggcagttccaccgcagcggc
tgcatctccatctggaaacacatctgccccatcttcaagggtatcggcttcgccatctgc
atcatagcgctgtacattgcgttctactacaacaccatcatggcgtgggccctgtactac
ctgctggcgtcattccggcccagcctgccctggaccacgtgctccaacccctggaacacg
gtcaactgtctccgctacctgtccaccgacagcaacgtcacctggaccaacacgtccacc
tcgcccgccgaggagttctatacgcgtcaggtactgcaggtacacctgtctccaggtctg
caccagcttggcagtgtgagttggcagctggctctctgcctcctgttcatcttcaccatc
gtctacttcagcatctggaagggagtcaagacctctggcaaggtggtgtgggtgacagcc
accttcccctaccttgtcctgctggtgctgctcgttcgtggggccactctacccggagcc
tggaggggcgtggtcttctacctcaaacctgattgggggaaactactcagcaccacagta
tggattgatgctgcagctcagatcttcttctctctggggccaggtttcggggttctcctg
gcctttgccagctacaacccctttcacaacaactgttacaaggatgcgttgctgaccagc
tctgtgaactgcctgaccagtttcctctctgggtttgtcatctttaccgtgctcggctac
atggctgagatgcgcaaaataggcgtggagaccgtagccaaggatgctggtcccagtctg
ctgttcatcatctatgctgaagccatcgccaacatgcccgctgccaccttcttcgccatt
atcttcttcctcatgatcatcatgctggggctggacagcacgtttgctggtctggagggg
gtgatcacagccatgctggatgagttcccccagttgttgtctaggaggagggagtggttt
gtcctgggcctggtgtgtgtctgctacctgggagcgctctccaccctcacctacggaggt
gcgtttgtggtgaaactgtttgaggagtacgccacgggacctgctgtcatcactgtggtc
ttcctagaagtcatcgccgtttcctggttctacggcatgagtcgtttctgtgctgatgtc
catatgatgctgggattctctcctggattgttctggagggtgtgctgggtggccatctgc
ccaatattcctactgttcatcattgtcagtttcctggcgttccccccggaggtcaagttg
tttgactacgtctacccaccttggacaacagttctgggctactgcatcggagtgtcctcc
ttcatctgtgtaccagcctacatgttgtaccacctgctcactgccaaagggacctttaaa
cagcgtctcctgaagggcatcactcctgtacccagtgggcctcacagtgacattatcatc
acccacgccgtctga
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