Oncorhynchus keta (chum salmon): 118374286
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Entry
118374286 CDS
T09424
Name
(RefSeq) protein quaking-A-like isoform X1
KO
K14945
protein quaking
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118374286
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118374286
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GFIT
Motif
Pfam:
STAR_dimer
KH-I_KHDC4-BBP
Quaking_NLS
KH_1
KH_KRR1_2nd
KH_12
Motif
Other DBs
NCBI-GeneID:
118374286
NCBI-ProteinID:
XP_052341824
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All DBs
Position
29:complement(8191830..8337646)
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AA seq
380 aa
AA seq
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MMVGEIEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLDRLLDEEIHRVRKDMYND
TANGPIDKLPLELPEALGPIIHLQEKLFVPLKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDRKKEEQNRGKPNWEHLNEDLHVLITVEDTQKRAEIKMKRALEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDTNIKTHPLAFSLAAAAAAAQGPRLMQAPQGQLM
APHQQMRPPTPAGPPIMNIIRQPQMQGMLPNGTPTLVPPSPDGSILYASPYDYPYALAPT
SLLEYPIDHSGVLGKRPWGLGGGPFSPGQEGSLFYPGFLDAASMSHGQDLLKGAMATKMR
RHDSRVHPYQRIVDRAATGN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatggttggagagatcgaggtgaaggagagaccgaggccgagtcccgactatttgatg
caattgttaaacgaaaagaagctgatgaccagtttgccaaatctgtgcggtatctttaca
caccttgaccggcttctcgatgaagagatccacagagtgaggaaagacatgtacaacgac
acagccaacggacctatagacaaactgcctctggaattacccgaggccctggggccaatc
attcatctgcaggagaagctctttgtgcctctaaaagagtaccctgactataacttcgtg
ggcagaatcctggggcctcgtggactcaccgccaagcagctggaagcggagactggatgt
aaaatcatggtgcgaggcaagagctccatgagggacagaaagaaggaggagcagaacaga
ggcaagcccaactgggaacatctgaacgaggacctgcacgtcctgatcacggtggaggac
acacagaagcgcgctgagatcaagatgaaaagagccttagaggaggtcaagaagctcctg
gtgcccgcggcggaaggagaggataatctgaagaagatgcagctgatggagctggccatt
ctcaacgggacgtaccgagacaccaacatcaagacacacccccttgcgttctctcttgca
gcggcggccgccgccgctcagggcccccgtctaatgcaggccccccaggggcagttgatg
gccccccatcagcagatgaggccccccacaccggcagggccccccatcatgaacatcatc
cgacaaccccaaatgcagggcatgttacccaatggcacccccaccctggtgcctccctcg
ccggacggcagcatcctctacgcctccccgtacgactacccgtacgccctggcgcccacc
tccctgctggagtaccccatcgaccacagtggggttctaggtaagcgaccctggggcctg
ggcggcggcccctttagccccggacaggagggcagcttgttttaccctgggtttttggac
gcggcttcgatgagccacggtcaggacttgttgaaaggtgcaatggctactaaaatgaga
cgacatgactcgcgcgtccatccttaccaaaggatcgtagacagagccgccaccggcaac
taa
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