Oncorhynchus keta (chum salmon): 118374316
Help
Entry
118374316 CDS
T09424
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03022
Basal transcription factors
oke03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118374316 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
118374316 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118374316 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118374316 (gtf2h1)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118374316 (gtf2h1)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118374316 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
118374316
NCBI-ProteinID:
XP_052336940
LinkDB
All DBs
Position
26:43265681..43290112
Genome browser
AA seq
550 aa
AA seq
DB search
MAALSEEVLLVVKRVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTNLHFSNESTALKDRDAAKDLLQQLLPKFKKRANKELEEKNRMLQE
DPVLFQLYKDLVVCQVISAEEFWANRLSINNVDHSLSNNKQEVGISAAFLADIRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKQKYGENVPHDMTEKEFWTRFFQSHYFHRDRINTGLQD
IFSECAKQDEKGLKSMVFQGVKNPMVDLLSLEDKSLDEGYGSNSSAPSTSNTNKTVKENS
NSAIIKRFNHHSTMVLAAGSGKKADAPNGQACETSSTDGNSRDSDFFQPPIKKVKIQDVI
EYEDLHRENGKKTVALNLKKSDRYSHGPVPLLPQQYTTSQDIVNSVNCIKQEIASYKPCL
TQVMSSSTASCAIAALSPGGVLMQALAQQAINQMVPNDVQGELKHLYTAAGELLRHFWSC
FPVNTLFLEEKVVKMRSNLERFQMTKLRPFQEKVQRQYMSTNLTGHLEDMFQMAYNKFHA
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttgtcggaggaggtgctgctggtggtgaagagggtccgacagaggaagcag
gacgggaccctctacctgatggcagagaggatagcctggggaccagaggggaaagaccgt
ttcaccgtcagccacctgtatgctgacatacgctgtcagaaaatcagcccagacggcaag
gccaagattcagctacagttggtcctacacacaggggagagcaccaacctccacttctcc
aacgagagcactgccctgaaagaccgcgatgcagccaaggacctcctccagcagctgctg
cccaaattcaagaagagggctaacaaggaactggaggagaagaacagaatgttacaggaa
gatccggtgctgttccagctgtacaaggatctggtggtgtgtcaggtgatcagcgctgag
gagttctgggccaatcggctgagcataaacaacgtggaccactccctctccaacaacaag
caggaagtgggcatctcggcagccttcttggcggacatccggccccagacagatggctgt
aacggccttagatacaaccttacatccgacattatcgagtcaatcttcagaacgtaccct
gcagtgaaacagaagtatggtgagaatgttcctcatgacatgacagagaaggagttctgg
acgcggttcttccagtcccactacttccaccgagatcgcatcaacacgggcctgcaagac
atcttctcagagtgtgcaaagcaggacgagaagggcctgaagtccatggtgttccaagga
gtgaagaacccaatggtggacctgctgtcactggaggataagtcgttagatgagggttat
gggtctaactcctcagcaccttctacgtccaatactaacaagaccgtgaaggagaacagt
aactctgccataatcaagaggttcaaccaccacagtaccatggtgctggcagcaggctcc
ggaaagaaagcggatgctcctaacggtcaggcctgtgagactagcagtacagatggaaac
tctagggattcggacttcttccaaccacccattaagaaggtgaaaatacaagatgtcata
gagtacgaggaccttcatagggagaatgggaagaagacagtggctctgaacctcaagaag
tctgacaggtactctcatggtcccgtgcctctcctgccccaacagtacaccaccagtcaa
gacatcgtcaactctgtcaactgtataaagcaggaaatagccagctacaaaccctgcctt
actcaggtgatgtccagcagtacagccagttgtgccatcgccgccctctctccagggggt
gttctcatgcaggcattagcacagcaagccattaaccagatggttcccaatgacgttcag
ggggagctgaagcatctgtacacggctgctggggagctgctgagacacttctggtcctgt
tttcctgtcaacacacttttcctggaagagaaggtggtaaagatgcggtccaacctggag
agattccagatgaccaagctccgccccttccaggagaaagtccagcgtcaatacatgagt
actaaccttactggtcaccttgaggacatgtttcagatggcctacaataaattccacgcc
tggcaaacgcgtcggatgatgaggaaaacctga
DBGET
integrated database retrieval system
