Oncorhynchus keta (chum salmon): 118374345
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Entry
118374345 CDS
T09424
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118374345 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118374345 (tbp)
03021 Transcription machinery [BR:
oke03021
]
118374345 (tbp)
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
118374345 (tbp)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118374345 (tbp)
RNA polymerase III system
TFIIIB
118374345 (tbp)
RNA polymerase I system
SL1/TIF-1B
118374345 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
118374345
NCBI-ProteinID:
XP_035616615
LinkDB
All DBs
Position
2:complement(6623416..6633230)
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AA seq
298 aa
AA seq
DB search
MEQNNSVPPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSLLEEQHRQQQQ
QASTQQGGVSGGSGQTPQLYHSQTVTTTTLPGNTPLYTTTPLTPMTPITPATPASESSGI
VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC
TGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFS
SYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagtgtgcctcctttccagggtcttgcctcccctcagggggcaatg
acacctggaatgcccatcttcagccccatgatgccctatggcagtggtctgactccccaa
cctgtgacgaacaccaacagcctgtctctcctggaggagcagcatcggcaacagcagcag
caggcttcgactcagcagggtggggtgtcagggggctcaggacagacgccacagctttat
cactcccaaacggtcaccaccaccacactgccaggaaacacccctctctacaccactaca
ccgctaacccccatgacacccatcacacctgccacacctgcctctgagagctctgggatt
gtcccacaactacagaatatcgtatccactgtgaacttgggctgtaaacttgacttaaaa
acaatagcactccgagctagaaatgctgagtacaatccaaagcgatttgctgctgttatc
atgagaatacgagagccaagaacaactgcacttatcttcagctctgggaaaatggtgtgc
acaggagccaaaagtgaagagcagtcccgcctggcggccaggaaatatgccagagtcgtg
cagaagttgggcttcccagccaaattccttgatttcaagatacagaacatggtgggcagc
tgtgatgtcaaattccccattcggttagagggacttgtactaactcaccagcagttcagc
agttatgaaccggagttgttccctgggctaatctatagaatgatcaaacccagaattgtc
ctgttgatatttgtttcaggcaaagttgtattaacaggtgcgaaggtgagaggagaaatt
tatgaagcatttgaaaacatctacccaatcttgaaaggattcaggaagacgacgtaa
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