Oncorhynchus keta (chum salmon): 118374388
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Entry
118374388 CDS
T09424
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118374388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118374388
03036 Chromosome and associated proteins [BR:
oke03036
]
118374388
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118374388
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118374388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
118374388
NCBI-ProteinID:
XP_052383707
LinkDB
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Position
10:complement(67058303..67076996)
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AA seq
1145 aa
AA seq
DB search
MFSPRPTPCSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSEALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPTSEFVYYADLISRSSPSPLETATVQSISFMAVAPEGTAGFWPSLAHEGNYAETV
VDMGENLCNFVVAVRGGSFVVSSYKGQLMRLGADPSGKPLQRAVQQGQGVLSGIGRRVSS
LFGMLAPLTNNNLHSVLWVGETGCLYTLTSCGLSKWKVDEVTEHQVLSWDSSRALTESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLAYFCLVTLLDNGNN
ISEELSVEVTKYNPPFQCEDALQAMRLLLPLASSPAAFLYNEELVFACSTGTGRGGLPEE
KIPFNTPGDRLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLCFSLAGAGPE
ATAMETPTRIEPVAQEDKTKLLKAAFLQFCRNDLVGAQNMTDELFPPEGDGDREVGGELD
LVVTRINLDLVDDYAASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHGCFMDFLLQV
GLLDRLGQTTVRSSPMATRLLLCEHAEKLQAAMTLKNHHAKHGELVNRAVLIALRKSNAT
VSTSLTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVISVNTIIKDMLQA
AGQYRDTKASLYRASESTTAEPEYIPWTASSGLGGMRTVIARQHEVILRDVYPHADSEMR
NGLNEQLTALLDVLLGGYVAQLTSLRPGRPGQQDHYNTLEMEYTQRRSELLAPLLELGQY
QWVAALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYMEKGKRGKLLS
QPIAQDQQLASFLQSHEHLSWLHHIHVHDFSSAHKTLYGQANMETRYFVKKKTLLALSKL
TALASDMPEAAMKKHCFLCHPTDMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLSAHNL
INLYICDDNRRANEYDFKKALDLLEYIDEEDAVDIEGLKCEIFCKALKKDEWSSADGNDD
PLEAAKDSIFVKILLKLIQEGVPLQTYLPDFKDLLQLDEMEALKSKPTFEFVMRANYEHY
LQEQI
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgtcccaccccttgttcaggccgaaggcagtcctcaagggtcaccggt
agaaagagtctcgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcccacgcgtgtgcagagctactcaacttcagaagcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgactatggct
gatgctgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgccagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccactagtgagtttgtctactatgctgacctcatctcgagatca
tctcccagccctctggagactgccactgttcagtctatctctttcatggcggtggctccg
gagggaacagccgggttctggcccagtttggcccacgaggggaattacgctgagactgtg
gttgacatgggcgaaaacctctgcaactttgttgtggctgttagggggggtagtttcgtt
gtgtcatcctacaagggccagttgatgcgtctcggggcggacccctccggaaagccgctg
cagagggcggtacagcagggccagggggtgctttccggcatcggacgccgcgtctccagc
ctctttggcatgctcgccccgcttaccaacaacaatctccacagtgttctgtgggtggga
gagacgggctgcctgtatactctgacctcctgtgggctcagtaaatggaaggtggatgag
gtcacagagcaccaggtcctcagctgggactccagccgtgctctgacggagagtgtcgcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggagggagtgaatgttacc
tacatggacatgcagctgagccaggatggcttggtagttttggcagcagcctggcacccc
tcagactccccctgcctggcctacttctgcctggtcaccctgctggacaacggcaacaac
atctctgaggagctctctgtggaggtcaccaagtacaacccccctttccagtgtgaggat
gccctccaggccatgaggctgttgttaccactggcctccagccctgctgccttcctgtac
aacgaggagctggtatttgcctgctccaccggtaccggcagaggaggtctacctgaggag
aagatccccttcaacacacctggtgaccgtctgcgtggtgggggctgctgtgccaacctg
ccggtgttcttctcccagaacagtggtctggtggccgtggtggccagggagagtgcctcc
atgctgcctgagaccatggaggactccctctgcttctccttggctggggccggccctgag
gcaactgctatggagactccgactaggatagagcctgtagcgcaagaggacaaaaccaaa
ctcctaaaagcagcattcctgcagttctgccggaatgacctggtgggggcccagaacatg
acagacgagctgttccccccggagggggacggagacagggaggtgggcggggagctggac
ctggtggtgacccggatcaacctggacctggtggacgactacgcagcctcagacccccgc
tgggccgagtctgtccctgacgagagtgctggcttccccctgacctccctcatcatcctc
caccagctagaggacaagatgaaggcccacggctgcttcatggacttcctgctacaggtg
ggtctcctggaccggttgggccagaccacagtgcgctcgtctcccatggcgacgcgcctg
ttgctgtgtgaacacgccgagaagctacaggcggccatgacgctgaagaaccaccacgcc
aagcacggcgagctggtcaatcgcgccgtcctcattgccttgaggaagagcaatgcaacc
gtgtccaccagcctcacggccgcagacgtcttcttcagagaggtgtctcagatctcctca
gtctttgagtgtctactggaagaggaggagaggactctgaaggagaaccctgtggactct
gtgaagtgggctgaagtggtgatcagtgtcaataccatcatcaaggacatgctgcaggct
gctggtcagtacagagacaccaaggcctcactgtacagagcctcagagagcaccactgct
gagccagaatacatcccatggaccgcctctagcggtctgggcgggatgcgcaccgtcatc
gcccgccagcacgaggtgatcctgcgtgacgtgtaccctcacgccgactcggagatgcgc
aatggcctgaacgagcagctgacagcactgctggatgtgctcctgggaggctacgttgcc
cagctgacctcactgagaccgggccgtccgggccagcaggaccactacaacaccctggag
atggagtacacgcagcgtcgctctgagctgctcgcaccactgttggagctgggtcagtac
cagtgggtggcggcactggcagagaaatattgtgactttgacattctggtccagatgtgt
gagcagactgacaaccagaatagactgcagcactacatggccaagttcgccgaccagaat
tttgcggacttcctgttccgctggtacatggagaagggaaagcggggcaagctgctctcc
cagcccatcgcccaggaccagcagctggccagcttcctgcagtcccacgaacacctcagc
tggctgcaccacatccacgtacatgacttcagcagtgcccacaaaaccctgtatggccag
gccaacatggagacacgttactttgtgaagaagaagaccctgttggctctcagtaaactg
actgccctggcatcagacatgcctgaggctgcgatgaagaaacattgttttctttgtcat
cctacagacatggtagagcaggagcggttcctgctgcaccaggagactctgcccaaacag
ctgctggaggagaaacaacagaaccctgacaccatgcccctgctcagcgctcacaacctt
attaatctgtatatttgtgatgacaaccgacgagccaatgagtatgacttcaagaaggct
ctggatctactggagtacatagacgaggaggatgctgtggacattgagggactcaagtgt
gagatcttctgcaaggccctcaagaaagacgaatggtcatctgctgatgggaacgatgac
cctctggaggcagccaaggacagcatctttgtcaagatcctcctcaagctcatacaagaa
ggtgttcctctacagacctaccttcctgacttcaaagaccttcttcaactggacgagatg
gaggctttgaaatcaaagcccacttttgagtttgtaatgcgggccaactatgaacattac
ctgcaagaacagatctga
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