Oncorhynchus keta (chum salmon): 118374418
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Entry
118374418 CDS
T09424
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118374418
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oke01007
]
118374418
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118374418
Enzymes [BR:
oke01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
118374418
Amino acid related enzymes [BR:
oke01007
]
Aminoacyl-tRNA synthetase
Class II (U)
118374418
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118374418
Prokaryotic type
118374418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
118374418
NCBI-ProteinID:
XP_035616727
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All DBs
Position
1:complement(19059477..19069516)
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AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFHALGRTYTDEEFDELCFEFGLELDEITSEKDIISREQGDTKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKQKMEAPRYRRVSPASSEPQRLVITEETTAVRP
YAVAAVLRNITFTQERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTYTAKPPG
DIRFKPLNQAKEYTAQELMSLYKTDSHLRHYLHIIEDEAVYPVIYDSNGIVLSMPPIING
DHSKISLNTKNVFIECTATDLTKAKIVLDMMVTMFCEYCEEPFTVEEVEVVYPDGRTCQY
PELAYRKETLSADFINRKVGISESTEHIAQLLTKMCLRSEVMSDGDQIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPRTTPRTYTIANQLPLNKLSELLRQDLAAAGFTEALTFALCS
QEDIADKLLKNISETRACRISNPKTAEFQVARTTLLSGLLKTVAANRKMPLPLRLFEISD
VVLKDESKDVGARNNRRLCAVYYNKSPGFEVIHGLMDRVMQLLEIKPGQGNGYHIQAADD
STFFPGRCAEIFACGKSIGRLGVLHPDVINRFELTMPCSALDIDIEHFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagtgtcaaaagggatcttctgtttcatgccttgggcagaacatatact
gatgaagaatttgatgagttgtgttttgagtttgggctggagctcgatgagattacctca
gagaaggacatcatcagtcgtgagcagggggacaccaaggcagagggggcgtctgatgtg
attctgtataagatcgatgtcccagctaaccgctatgaccttctgtgtctggaagggctg
gtcaggggcctgcaggtcttcaagcagaagatggaagcccctcgctacaggcgtgtgagt
ccagccagcagtgagcctcagaggctggtcatcacagaggagacaactgctgtgcgaccc
tacgctgtggctgcagtcctgaggaacatcaccttcacacaggaacgctacgacagcttt
atcgaactacaggagaaactccatcagaatgtctgtaggaaaaggactctggttgccatc
ggcacccatgacctggacaccatttcaggccccttcacctacacagccaaaccacctggt
gacatccgcttcaaacctctcaaccaggccaaggagtacaccgcacaggaactcatgagc
ctctacaagacagacagccacttgcgacactatctgcacatcattgaagacgaggctgta
tatcctgtcatctatgacagcaacggcattgttttgtctatgcctccaatcatcaatggg
gaccattccaaaatctccttgaatacaaagaatgtttttatcgagtgcacagccactgac
cttaccaaggcaaaaattgtgttggacatgatggtgacgatgttctgcgagtattgtgaa
gagcctttcacggtagaggaggttgaggtggtgtacccagatggaaggacctgtcagtac
ccggagctggcttacaggaaggaaactctgtcagctgacttcatcaaccgtaaagttggc
atcagtgagtcgactgagcatatcgctcaactgttgaccaagatgtgcttgcgctcagag
gtcatgagtgacggcgaccagatcgaggtggagatcccgcctacgcgctctgacgtcatc
cacgcctgtgacatcatggaggacgccgccatggcgtacggtttcaacaatattccccgc
accacgccgcgcacatataccatagccaatcagctcccactgaataagctgtcggagcta
ctgagacaggacctggctgctgctggattcacggaggccctcaccttcgccctgtgttct
caagaggacatagctgacaagctgttgaagaacatctcagagaccagagcatgtcgcatc
tccaaccccaagacagctgagttccaggtggcgcgcaccaccctgctgtcaggcctgctg
aagactgtggctgccaacaggaagatgcctctgcctctgaggctgtttgagatttcagac
gtggtgctcaaggatgaatccaaagacgtgggggccaggaacaaccgtcgcctgtgtgct
gtctactacaacaagagtcctgggtttgaggtgatccatggtctgatggacagggttatg
cagctgctggagatcaaaccaggccagggcaatggctaccacatccaggctgctgacgat
tccaccttcttccctggtcgctgtgctgagatctttgcgtgcgggaagagcataggacgc
cttggggtccttcaccctgatgtcatcaaccgctttgagctcaccatgccatgctccgcc
ctggacatcgacattgagcacttcctgtga
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