Oncorhynchus keta (chum salmon): 118374496
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Entry
118374496 CDS
T09424
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118374496
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Major cadherins
118374496
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
118374496
NCBI-ProteinID:
XP_035616825
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All DBs
Position
4:complement(35323000..35448211)
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AA seq
806 aa
AA seq
DB search
MGDRLHHYLGGGRPVYTLLLPLALALLTLLCEAQGHMDKARSPEESRAGLLRRVKRGWVW
NQFFVLEEYTGLEPLYIGKLHSDMDLGDGSIKYILSGDGAGTTFTIDDSTGDIHAIKRLD
REVKAQYMLKAQAWNRQTDRPLEPESEFIVKIQDINDNEPKFQDGPYQATIPEMSTIGTE
VIRLTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGEVRVSLAGMDREVREIYSIIIQ
AKDMGGQLGGLAGTTVVNITLSDVNDNPPMFDQKLYQMSVLESAPVGSVVGRIRAKDRDI
GINAEMMYSIIDGDGRDTFDISTDPTNLFGIITIKKPLNFESKASYTLKIEGANTHLDHR
FLDKGPFSHVTIVHVSVEDIDEPPEFSSAAYYIEVSEEAEIGTVFTTVSARDPDASNNSI
RYSIEMTTDLGKYFYIDITSGALMTVQALDREELSWHNITVLAMEMSNPSMIGSVSVAVK
ILDVNDNPPSLTHYFEAFVCESAKAGQLIQTVTAIDPDDPLGGQHFYYSLAPEAANNPNF
TLRDNQDNTAWILTRRGGWSQQDQSVYYLPIIISDGELPVQTSTSTLTIRVCSCDVEGNV
MSCNAEAYHLPASLSRGALIAILACIFVMLVMILLMLSLRSHRKKPYLHDEEDNVHENIV
RYDDEGGGEEDTEAFDIAAMWNPHEAHLVGKQRQDMLPEIESLSRYVPLACVGWPGSVCV
GGDSNVQGYVLSKLLEADLDPCAPPYDSLQTYAYEGEGSVAESLSSLQSGCSNTDHEYDY
LNDWGPRFKKLAEMYGVLETNNPPMW
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcgacttcaccactatcttgggggtggtaggcctgtctacaccctactactc
ccactagctctagccctgctgaccctgttgtgtgaggcccagggccatatggataaagcc
aggtcaccggaggaaagtagagcagggctgttgaggagggtgaagagaggctgggtatgg
aaccagttctttgtgctggaggagtacactggactggagccgctatacattggaaagctc
cactcagacatggacctaggggatggctcaatcaagtacatactatcaggagacggtgcc
ggcaccaccttcaccattgatgacagtacaggagacatccatgccatcaagaggctggac
cgcgaggtcaaggcccagtacatgctgaaagcccaggcctggaacagacagacagaccga
cccctagagcccgaatctgagtttatcgttaagatccaggacatcaatgacaatgaacct
aagttccaggatgggccctaccaagccaccatacctgagatgtcaaccattggcactgag
gtgattcggctgaccgctacagatgctgatgaccctacatatggtaacagtgccagagtg
gtctacagcatcctgcaaggacagccatacttctctgtggagcccaagactggcgaggtg
cgtgtgtctctggcgggcatggaccgagaggtcagagagatctactccatcatcatccag
gccaaggacatgggaggccagctagggggtctggctggaaccactgtcgtcaacatcacc
ctcagcgacgtcaacgataacccacccatgtttgatcagaagctgtatcagatgagcgtt
ctggagtcggctcccgtggggtctgttgtgggtcgtatccgggcgaaagatcgtgacatt
ggcatcaacgcagagatgatgtacagcatcattgatggagacgggagggacaccttcgac
atcagcacagaccccaccaacctgtttggcatcatcaccatcaaaaagcctctgaacttt
gagagcaaagcaagctacactctgaagatagaaggagccaacacacacctggaccaccgt
tttctggacaagggcccgttcagccatgttaccattgttcacgtcagtgtggaggatata
gacgagcccccagagtttagctctgctgcatactacatagaggtctctgaagaagcagag
attggcacagtgttcacgacggtctctgccagagaccctgatgcttccaataactccatc
aggtattcaatagagatgaccactgacctggggaaatatttctacattgacatcacttcc
ggggcgttgatgacggtgcaggcgctggacagagaagagttatcctggcataacatcacc
gtcctggcaatggagatgagtaatcccagtatgatcgggagtgtgtctgtagctgtgaag
attctggacgtgaatgataaccctccatcgctgacacactattttgaagcattcgtctgt
gagagcgccaaggctggacagctgattcagacagtgacagcaatagacccagatgatcct
ctgggaggtcagcatttctactacagcctggcaccagaggctgctaacaaccccaacttc
accctcagagacaaccaagacaacacagcatggatcctgacgcggcgtgggggttggtct
cagcaggaccagtcagtctactaccttcctatcattatctcagatggagagctgccggtc
cagaccagcaccagcaccctgactatccgtgtgtgtagctgcgatgtggagggcaacgtt
atgtcctgtaatgctgaggcctaccacctaccggctagtctgagcagaggggcactcatc
gccatactggcatgtatcttcgtgatgctcgtgatgatcttgctcatgttgtccctccgg
agccaccgtaagaagccctacctgcacgatgaggaagacaacgtccacgagaacatcgtc
cgctacgatgacgaggggggcggagaggaggacaccgaggccttcgacatcgctgccatg
tggaacccccacgaggcccacctagtggggaagcaacgtcaggacatgctgcccgaaatc
gagagcctttcacgctacgttccccttgcatgtgtgggctggccagggagcgtttgtgtt
ggtggagacagcaacgtgcaggggtatgtgctatccaagctcctggaggcggatttggac
ccctgcgccccaccttacgactccctacagacctacgcctatgagggggagggatcggtg
gctgagtccctgagctcgctgcagtctgggtgctccaatactgatcacgagtatgattat
ctcaatgactgggggcccaggtttaagaaactggcagagatgtacggggttctggagaca
aacaaccctcccatgtggtag
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