Oncorhynchus keta (chum salmon): 118374569
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Entry
118374569 CDS
T09424
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118374569
03012 Translation factors [BR:
oke03012
]
118374569
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118374569
mRNA cycle factors
Stress granule specific factors
118374569
Translation factors [BR:
oke03012
]
Eukaryotic type
Initiation factors
eIF-4
118374569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
DUF3689
Motif
Other DBs
NCBI-GeneID:
118374569
NCBI-ProteinID:
XP_035616899
LinkDB
All DBs
Position
1:19304778..19376446
Genome browser
AA seq
1670 aa
AA seq
DB search
MNKAPQSITRPHPALSPGLQLPTFPPGQPPSVVFATPPPPQMNPAPQPRQFAPVPRALHQ
QGGFRSLQPYYSRSSLHSNAPRVPPSSTPRPVAPTHVYQPGQQMMMIPSQRIPFPNQQGP
AYFIPGQYRSTYVATPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTSSLPASPV
IMNPPPQQQQLPPQQQIQPKRERKQVQITIRDPNQGGRDITEEIMSGGTRSGTTPTPPQV
SDDSSESSGSEGPAVAQANDENVTPVVVRPDDRGKPAATLITGPPALSKTPELVKTAPTE
VKLPDTDSKSPSLPQDLPTPPRVTTTLHTTAPGTAPPSTSPIADMMDAPAPAAAPALSAP
KVPAYPAPLPEPRPTPAAEEQPSATKEAREEVKEKEIKEVTEAREVTTSSKPEPSLAPVT
NPSSSTNGVSATQPLPEEEPVALSITMPSLQAAEPLLESPIAQQEELRLPNGLPLRSSQD
PEKVSAELSECDLSPIAEPEVAPLQREAPTHVAATAKPDPVVQAAVAPVVLAETAITTEV
TPRQIEDEMDSPPSQRTIPPGENSMQAAVSVPKKKRKMKDLNRKEAVGDLLDAFKEEQVV
QSPPEQATPTSASDTEEPRPATTPAVAEVGETWEEKEDKLDAENIEPKPGDLKYQYKEEL
CRLIDPEEKKRYDRDFLLGFQFISAAMSKPEGLPQINDVVLDKANKAPLRQLDPSRLPGM
NMGTDFTPSFANLGRPGMGGGGGGGHRGPPSGMGGGGPRRSQQGQRKEPRRIINISSSLT
DDVKLNKAEDAWKPAVKKAASGQAAPEEESDNPEQAKTHELFKRVRSILNKLTPQMFQQL
MKQVKELTIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPGVTVNF
RKLLLNRCQKEFEKDKDDDVIFEKKQEELDAAAMEEKDRLKAELEEAKDIARRRSLGNIK
FIGELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFV
QMDKIIKEKKTSSRIRFMLQDVLDLRRNTWVPRRGEQGPKTIDQIHKEAELEEHREVLKV
QQQLLNQNTRGGRGGGGGRDQGNRGGQHPQSGQRSQPQDEGWNTVPISTKSRTIDTSRLS
KITKPGALDFNNQLLAPQLGGKGLWGSWGKGSSGGTTGAKPAGEATPESGGRPATSTLNR
FSALQPQQPSSSGPSQDSDRRVPLRNSSSRDRGSNDRFGRRDDRNPVTKRSFSRETEDHR
SPSDPIRRVSSMTDDRGTRDRARSKENVKREAAATPPAQTKPSLREDELEKKATAIIEEY
LHINDMKEALQCVVEMNSTRLLFVFVRSGLESTLERSPIARERTGLLLHQLYKAGTLPTE
QYYRGLQEIMEVAEDMAIDIPHIWLYLAELITPMLHEGGIPMGPLFKEISKPLVPQGTAG
VLLAQILTLLCRGMSHKKAGAMWREAGLSWKDFLPEDEDVNKFVTEKNVEFTLGGGGGDD
EKSSKKKLSSEELNKQLDRLIQDKADNQRLCDWVEANLDETQISSNMFVRAVMTAICQSA
ILCENPYKLDAKVITRRAKLLHKYLKDEQKELQALYALQALMVEMEQPANLLRMFFDTLY
DEDVIKEQAFYKWESSKDPAEMQGKGVALKSVTAFFTWLREAEDEESDNS
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagtctataacgcgaccccaccctgccctctcccctggactccag
ctacccaccttccctcctggacagcccccctctgttgtctttgccacccccccacctcca
caaatgaacccagcgccacagccccgacagttcgcccccgtgccccgtgctttacaccaa
cagggaggattcaggtcactgcagccgtactacagccgttctagtctgcacagcaatgcc
cccagggtgccccccagcagcacgccgaggcccgtggcgcccacacacgtctaccagccg
ggccaacagatgatgatgatcccctcacagcggatccccttcccaaaccaacaaggcccc
gcctacttcatacccggacagtaccggtcaacgtacgtggccaccccccagcagtacccg
gtcccgccgggcaccccaggcttctacccaggcaccagcccagctgaatatggtacttat
gcaggggcatactacccggcccaacagcagtacacgtcctccttgccggcttctccggtt
atcatgaaccctcccccccagcagcagcaactacctccacagcaacagatccagcccaaa
agggagcgcaaacaggtacagatcacaatacgagaccctaaccagggtggtagagacatc
actgaggagattatgtcagggggcactcgcagtggcaccacccccacacccccacaggtg
agcgacgactcttcagagtcatctggatcagagggcccagctgttgcccaggccaacgat
gagaacgtgacacctgtcgtggtcagaccagatgacagggggaaacctgcagccacactc
atcactggccccccagccctgtctaaaacccctgaactggtcaagactgcccctacagag
gtcaaactcccagacactgacagtaaatccccttccttaccccaggacctacccacaccc
ccgcgggtaactaccaccctccacactactgcccctggcaccgccccaccctcaactagt
cccattgcagacatgatggacgcaccagccccggccgctgctccagccctatctgcccct
aaagtgcctgcttaccctgcacccctacctgaaccccgccccactcctgcagctgaggag
cagccctcagccaccaaggaggcgcgggaagaggtgaaggagaaagagattaaagaggta
acggaggctagagaagtgactacatcatctaaacctgagccttcccttgctccagtgacc
aaccctagcagcagcactaacggtgtgtctgccacccagccactcccagaggaggagcca
gtagccctgtccatcaccatgccctccctccaggcagcagaacccctgctggagtctccc
atcgcccagcaagaggagctccgtctgcccaacggcttgccgctccgcagctcccaggac
cctgagaaggtttctgcagagttgtctgagtgtgacctcagccccatcgctgagcctgag
gtggccccattacagagggaggcacccacgcatgtcgccgccacggcaaagcccgacccc
gtcgtccaggcggccgttgcccccgtggtccttgctgagactgctattactacagaggta
acccctcgccaaattgaagatgagatggactctccaccatcacagcgcaccatcccaccc
ggggagaattctatgcaagctgctgtttctgtgcctaagaagaagaggaagatgaaggat
ctgaacaggaaggaggctgttggagacctcctggatgcctttaaggaggagcaggtagtg
cagagcccgccagagcaggccacacccacttctgcctctgacacagaggagccccgccca
gccaccacccctgccgtcgcagaggtaggtgagacgtgggaggagaaggaggacaaactg
gatgcagagaacattgaacccaagcccggggatctgaagtaccagtacaaagaggaacta
tgtaggcttatagacccagaggagaagaagaggtatgacagggacttcctgctgggcttc
cagttcatcagtgctgccatgtccaagcctgagggcctgcctcagatcaatgatgtggtg
ctggacaaggcgaataaggcccctctccgccagttggaccccagccgtttgccggggatg
aacatgggcactgacttcacgccctcatttgccaacctgggcaggcctggaatgggggga
ggaggaggaggtggacacagaggaccaccctctggtatgggtggtggaggaccgcgtcgc
tcccaacagggtcagcgtaaggagcccaggaggatcatcaacatctcttcgtctctgacg
gacgacgtgaaactcaacaaggctgaggatgcctggaagcccgctgtcaagaaggctgcc
agtgggcaagcggctcctgaggaggagagcgacaacccagaacaggccaagacccatgag
ctgtttaagagggtccgtagtatcctgaacaagctgacccctcagatgttccaacagctg
atgaagcaggtcaaggagctgaccatcgatacagaggagaggctgaagggagtgatagat
ctgatctttgagaaggccatttctgaacccaacttctccgtggcctacgccaacatgtgc
cgctgccttatggggctcaaagtccccactacagacaagccgggagtcactgtgaatttc
cgcaagctgcttctgaaccgttgtcagaaggagtttgagaaggacaaggacgatgatgtc
atctttgagaaaaagcaagaagagctggacgctgcagccatggaggagaaggatcgcctg
aaggcggagttggaggaggccaaagacattgcacggcggcggtcgctaggcaacataaag
ttcatcggtgagctgttcaagctcaagatgctgacagaggccatcatgcacgactgcatc
gtcaagctgctgaagaaccacgatgaggagtcactagagtgcctctgtagactcttgtca
actataggcaaggacctggactttgaaaaggcgaagcctcgtatggaccagtactttgtc
cagatggacaagatcatcaaggagaagaagacatcttccagaatccgcttcatgctgcag
gacgtactggacctcaggaggaatacgtgggtccccaggagaggagagcagggccccaag
accatagaccagatccacaaggaggcagagctggaggagcacagggaggttctcaaggtg
cagcagcaactcctcaaccagaacacccgaggaggacgtggaggaggaggaggtagagat
caggggaaccgcgggggccaacacccccagtcgggccagaggagtcagccccaggacgag
ggctggaacacagttcccatctccaccaagagcagaaccatcgacaccagccgactcagc
aagatcactaagcctggggctttggacttcaacaaccagctgctggcgccccagctcggg
ggtaagggcctgtggggcagttggggcaagggcagcagtgggggcaccaccggagccaaa
cccgccggggaagccaccccagagtcaggaggccgcccagccaccagcacccttaacagg
ttctcagccctgcagccacagcagccctcctcctcagggccctcacaggactcggacaga
agagttcctctaaggaacagctcgagccgggaccgtggcagcaacgaccgcttcggccgg
cgggacgacaggaacccggtcaccaagcggagctttagtagggagactgaggatcaccgc
agcccttctgatcccatacgccgcgtttccagcatgaccgacgaccggggcaccagagac
cgagctaggagcaaagagaatgtgaagagggaagctgctgcaacacctcctgcccagacc
aaaccttccttgagggaagacgagctggagaagaaggccacagctatcatagaggagtac
ctacacatcaacgacatgaaggaggcgttgcagtgtgtagtggagatgaacagcacccgg
ctgctctttgtgtttgtacggagcggtctggagtctactctggagcgcagccccatcgcc
agagaacgcaccggcctgctgctgcaccagctgtacaaggcaggcaccctgcccacagag
cagtactacagagggcttcaggagataatggaggtggcggaggacatggccatagacatc
ccccacatctggctctacctggctgagctcatcacccctatgctccacgaaggaggcatc
cccatgggaccgctcttcaaggagatatccaagcccctggttcctcaggggacggctgga
gttctcctggcccagatcctcaccctactctgcagaggaatgagccataaaaaggcaggc
gccatgtggagggaggcggggcttagctggaaagactttctgcctgaggacgaggacgtc
aacaagtttgtgacagaaaaaaatgtggagttcaccctgggaggaggaggaggagatgat
gagaagagcagtaagaaaaagctgagctcagaggagctgaacaaacagctggatagactc
atacaggacaaggctgacaaccagaggctctgcgattgggtcgaggctaacctggacgag
acacagatatcctccaacatgtttgtcagagcagtcatgacagccatctgccagtcggcc
atcctgtgtgagaacccttacaagttggatgcgaaggtgatcacccggagggccaagctg
ctccacaagtacctgaaggatgagcagaaggagctacaggctctctacgccttgcaggcc
ctcatggtggagatggagcagcctgccaacctgctgcggatgttctttgacacgctgtac
gacgaagacgtgatcaaagagcaggccttctacaagtgggagtccagcaaggaccccgct
gagatgcagggcaagggtgtggccctgaagtcagtcactgccttctttacctggctccgt
gaggccgaggacgaggagtctgacaacagctag
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integrated database retrieval system
