Oncorhynchus keta (chum salmon): 118374614
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Entry
118374614 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase 5
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00600
Sphingolipid metabolism
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
118374614
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
118374614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_PGAP2IP
Motif
Other DBs
NCBI-GeneID:
118374614
NCBI-ProteinID:
XP_052368541
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MSLRESPFPNSFVEGLHAVSWGLILPCFWFLDRLIAVCMSTSLERTQRHEQECYLHPLKV
FFGFIIFLALFLVMAPLAFLGFLLWAPLQAARRPFSYHHEPPSRPAPAEGERNLGFEAGA
NKATFGFATANLCLLPDGIARFNNLGHTQRRATAIGRSIVQGVNRPHIRIFVDSPSSCGT
LSPSSSLLPAPPPSPASYGATDPACQPPPQAQSDEARPVINTNHNSNQQDRKGHRNPPRA
LRTQGSPSAVRLDQDVPWEVSSLFPANVDILCLEEVFDKRAAVKLTNTLGTLFNHILYDV
GVYACQPPGSCSSFKFFNSGLFLASRYPVLEAQYHCFPNARGEDALAAKGLLSAKVLVGQ
NQKEKKLVGYFNCTHLHAPEGKEIRCEQLNMLTKWIQEFQVTNSKPDEVVVFDVLSGDFN
FDNCSPDDSLEQKHSLFEEYRDPCRAGPGQEKPWVIGTLLEQPTLYHEDVRTPENLQRTL
EREELRKQYISSPVALEGCPMVYPELGQPWVGRRIDYILYRESSISKHCRTEIEEFTFVT
QLAGLTDHIPVGLRLNVFLDSDTAQSE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcgggagtctccattccccaacagctttgtggagggcctgcatgcagtgagc
tggggtcttatcctgccctgcttctggttcctggaccgcctcattgccgtctgcatgtcc
accagcctggaacgcacccagcggcacgagcaggagtgttacctccaccctctcaaggtg
ttcttcggcttcatcatcttcctcgccctcttcctggtcatggctcccctggccttcctg
gggttcctgctttgggctcccctccaggctgcccgaaggcccttctcctaccaccacgag
cccccgtcgaggccagcaccagctgagggggagaggaacctgggctttgaggcaggggcc
aacaaggccacttttggttttgctactgccaacctgtgcctattgccggacggaattgcg
cgcttcaacaacctggggcacacgcagcgccgtgccaccgccatcggccggagcatcgtg
cagggcgtgaaccggccacacatccgcatctttgtggactctcccagtagctgtggcacc
ctcagcccctccagtagcctgctcccggcccctccaccaagccctgcctcatacggcgct
acagacccagcctgccagccaccaccccaggcccagtcagacgaggcccgccccgtcatc
aacaccaaccacaactccaaccagcaggaccggaagggccacaggaaccctccgcgggcc
ctacgcactcaggggtcgcccagcgcggtcaggctggaccaggacgtgccctgggaggtg
tcttctctcttcccggccaacgtggacatcctgtgtctggaggaggtgtttgataagagg
gcagctgtgaagctgaccaacaccctggggaccctgttcaaccacatactgtatgatgta
ggggtgtacgcctgccagcctcccggcagctgctcctcctttaagttcttcaacagcggc
ctgttcctggccagccgttacccagtgctggaggcccagtaccactgcttccctaacgcc
cggggggaggatgccctggctgctaaaggcctgctctctgccaaggtgctagttggccag
aatcagaaagagaagaagctggttggatattttaactgcacacacctccatgcacctgaa
ggcaaggagatccgctgtgagcagctcaacatgctcaccaagtggatccaggagttccag
gtgaccaatagcaagcctgatgaggtggtcgtgtttgacgtgctttctggggatttcaac
ttcgacaactgctcacctgatgacagtctagaacagaagcacagtctgtttgaggagtac
agagacccctgcagggccgggccgggccaggagaaaccctgggtcattggcactttgctg
gaacagcctactctgtatcatgaggatgtaaggaccccagagaatcttcaaaggaccctg
gagagagaggagctgaggaagcagtacatctcctctcctgtggccctggaaggctgtccc
atggtctaccctgagttgggtcagccttgggtggggcggcgcatcgactacatcctctac
agagagagttccatctccaagcactgccgaactgaaattgaggagttcacctttgtgact
cagcttgctggcctcaccgaccacattccagtgggcctgaggctcaatgtgttcctggac
tcagacactgcccagtccgaatga
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