Oncorhynchus keta (chum salmon): 118374728
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Entry
118374728 CDS
T09424
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118374728 (dcaf5)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118374728 (dcaf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
118374728
NCBI-ProteinID:
XP_052341505
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Position
29:complement(1686932..1719953)
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AA seq
860 aa
AA seq
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MRNRKLARLTAPGKMKEVKGCGMRSSVGFLSQRRLFGNPLMKEEFQRLRLAGCTSLYKKD
MLGHFGCVNAIEFSNNGGEYLVSGGDDRRVLLWNMERALHARSAKPLKLKGEHLSNIFCL
AFDSTNKRVFSGGNDEQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRV
LIWDTRERPHGEPFCLANYPSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRTSLLRY
GGSMSLQSAMSVRFNSAGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCF
AGDEDQYILSGSDDFNLYMWRIPKDPEAGGPGRVVNGASMVLKGHRSIVNQVRFNPSTYM
ICSSGVEKVIKAWSPYQQTESLGDLDSLVEESRSLYSHEEYINLVLNSGSGLSHDYVSQS
IQEDPRMMAFFDSLVRREIEGWSSDSDSDLSEGAILQLHARGRRSTRAVGDGAGVLVGSG
VAAPVPPSAAATVDSDHSSSSSLAAPEASGAEHTEGVEPLQPRRRGSRYQQSVFLLDLVG
EDSDSSGFWPDPMPRPRSPSPRDNSTLSSPTSSPAGASSSSSSSTSSTSSEDEEQRRASR
RQRTAARWRRMHFPRLSSGGRPESAQALYPGGVDSCSYPKISIDEASSSSASSTELQQDQ
DSVQIGPHRSGSKTGRRTSHTLPGSSPAVSLDSQDDRAEQEGLLIASLLSQDALQQRNES
RAGRVGERRAALERMAEGLDSPEEADESDHSRWIPPSSRHHSPGLNGLQHLDMTEVPVGC
RGRLAPDLFESSDSEGERETLELKSAGTRTLVEEEEEGGSSSSQRGSSQGALKRTHLGSR
GQGSGEGSGGSETSEKKFKT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatcgcaagctggctaggctcaccgctccaggaaaaatgaaggaggtgaagggt
tgcggtatgcggtcctccgtgggctttctgtcccagagaaggctcttcggtaacccgctg
atgaaggaagaatttcagagactccggttggcaggatgcacgagcctttacaagaaagac
atgctgggacatttcgggtgtgtaaacgccatagagttttccaacaatggaggagaatac
cttgtgtccggaggggatgaccgcagggtgttactatggaacatggagagagctcttcat
gcccgctcagccaagcctctcaaactgaagggagaacacctctccaacatcttctgtctg
gcattcgacagcaccaacaagagggtgttttctgggggcaacgatgaacaggtcatcctt
catgatgtagaacgaggcgagactctgaacgtgttccttcacgacgatgcggtgtacggc
ctgtcggtcagccccgttaacgacaacgtgttcgccagctcctcggacgacggacgggtc
ctgatctgggacacgcgtgagcgaccacacggagagcccttctgtctggccaactaccca
tcagccttccacagtgtgatgttcaacccggcagagccccgactactggctacagccaac
tccaaggaaggggtggggctgtgggacatacgcaaacctcgcacttctctgctgcgatat
ggtggcagcatgtccctccagagtgccatgtcggtgcgttttaacagcgcagggacccag
ctcctggccctgcgtcgcaggctacccccggtcctctacgagctacactctcgcctaccc
agcttccagttcgacaaccagggctacttcaactcctgtaccatgaagagctgctgcttc
gctggagacgaggatcagtacatcttgtctggatcagatgacttcaacctttacatgtgg
agaatccccaaggatcctgaagcaggaggcccgggtcgtgtggtcaacggagcgtccatg
gtcctgaaaggtcaccgttccatcgtgaaccaagtccggtttaaccccagcacttatatg
atctgctcctccggggtcgagaaggtcatcaaggcgtggagcccctaccagcagacggag
agtctgggagacctggatagtcttgtggaggagtccaggagtctgtacagccacgaggag
tacatcaacttggtcctgaacagcggcagcggcctgagccacgactacgtctcacagtcc
atccaggaggatcctcgtatgatggccttctttgactctctggttcgtcgggagatcgag
ggctggagttcggactcagacagtgacctgagtgagggggccatcctgcagctccacgcc
aggggacggcgttccacacgggctgtaggagacggcgccggggtcctggttgggagtgga
gtcgccgcgcctgtaccgccctctgctgctgctaccgtcgactcagaccactcctcatcg
tcctcattagctgcccccgaggcctcgggggcggagcatactgaaggggtggagccactg
cagccgaggaggcgtggcagcagatatcagcagtctgtgttcttattggacctggtggga
gaggactctgactccagtggattctggccagaccccatgccccggcctcgctctcccagc
ccccgagacaactccaccctctccagccccacctcctcccccgccggcgcctcctctagc
tcctcctcttccacctcctccaccagctctgaggacgaggagcagaggagagccagtagg
agacaacgtactgcagcccggtggcgccgcatgcatttcccccgcctgtccagtgggggg
cgccccgagtccgcccaggccttgtaccccgggggggtcgactcctgctcctaccccaag
atctcaatcgacgaggcctcatcctcctccgcgtcctccacggagcttcagcaggaccag
gactcggttcagatcggaccccacagaagtggctctaaaacggggagacgcacgtcgcac
actctccctggttctagccctgcggtgtctctggacagccaggacgaccgagcggagcag
gaggggctcctcatcgcctcccttctgtctcaagacgccctgcagcagaggaacgagtcc
cgggcaggaagggttggggagaggagggctgctttagagaggatggccgagggcttagat
agtcctgaagaggccgacgagtccgatcatagtcgctggatcccccctagttccagacac
cacagccctgggctgaacgggctgcagcaccttgacatgactgaggtgccggtaggctgt
aggggtcgcctggctccagacctatttgaatcctcagactccgagggagagagagagacc
ttagagttgaaatcagcaggcactaggaccctggtggaggaggaggaggagggggggtca
tcgtcgtctcagagaggctcatcccagggtgcgctgaaacggactcaccttgggtcaaga
ggtcaagggtcaggggaggggtcaggggggtcggagacctcagagaagaagttcaagaca
tga
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