Oncorhynchus keta (chum salmon): 118374832
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Entry
118374832 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: transportin-2-like
KO
K18727
transportin-2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118374832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118374832
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118374832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
HEAT_2
TOR1L1_N
IBN_N
Arm
TPR_IMB1
TPR_IPO5
Vac14_Fab1_bd
Cnd1
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
Ltn1_1st
Dopey_N
UNC45-central
HEAT_MROH2B_1st
INTS7_N
TPR_TTI1_C
RTP1_C1
DUF1475
TPR_IPO11
Caerin_1
Motif
Other DBs
NCBI-GeneID:
118374832
NCBI-ProteinID:
XP_052373735
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MEWQPDEQGLQQVLQLLKDSQSPNTATQRAVQQKLEQLNQFPDFNNYLIFVLTRLKTEDE
PTRSLSGLILKNNVKAHYQNFPPAVADFIKQECLNNIGDPSPLIRATIGILITTITSKGE
LQTWPELLPQLCNLLNSEDYNTCEGSFGALQKICEDSSELLESDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALATDEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVSLEACEFWLTLAEQPICKEVLSGHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLQHEGGEGEEGEDIDE
DDDDDDDTLSDWNLRKCSAAALDVLANVFRDELLPHLLPLLKGLLFSPDWVTKESGILVL
GAIAEGCMQGMVPYLPELLPHLIACLCDKKALVRSIACWTLSRYAHWVVSQPPDSHLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLYTPLFILIIYIYTLVHHLNQPVSLDFHLVSKLMTFCXRDNMLGKSSKLKMEHK
DLFPLLECLSSVATALQSGFLPYCEPVYQRCVTLVQKTLAQAMMYNQHPDQYEAPDKDFM
IVALDLLSGLAEGLGGSVDQLVARSNIMTLLFQCMQDPMPEVRQSSFALLGDLTKACFPH
VKPCIAEFMPILGLNLNPEFISVCNNATWAIGEIAMQMGADMQPYVGLVLNNLVEIINRP
NTPKTLLENTAITIGRLGYVCPQEVSPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMI
GVNPAGVVQDFIFFCDAVASWVSPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLK
ERLSACYGV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccggatgaacagggactccagcaggtcctccagctcctcaaggactcc
cagtcccccaacacggccacacagagagcagtgcaacaaaaacttgagcagctcaaccag
tttcctgacttcaacaactatctaatctttgtgctcacaagactgaaaactgaagatgaa
cccactcgttctctgagtggtctgatcctgaagaacaatgtgaaggcccactaccagaac
ttccccccggccgtggctgacttcatcaagcaggaatgcctcaacaacataggcgacccg
tcgcccctcatccgcgccactatcggtatcctgatcaccacgatcacttctaaaggggag
ctgcagacctggccagagctgctgccccagctgtgtaacctgctcaactctgaggactac
aacacctgtgagggctcgtttggagccctgcagaagatctgcgaggactcatcggagctg
ttggagagcgacgcactcaaccgcccgctcaacatcatgatccccaagttcctgcagttc
ttcaagcactgcagccctaagatcagatctcatgccatcgcctgtgtgaaccagttcatc
atcggcagagcccaggccctgatggacaacatcgacaccttcatagagagcctgtttgcg
ctggctacagacgaggactctgaggtgaggaagaacgtgtgccgggctctggtcatgctg
ctggaggtccgtatcgaccggctaatccctcacatgcacagcatcatacagtacatgctg
cagcgcacacaggacccggatgagaatgtttctctggaggcctgtgagttctggctcacc
ctggctgagcagcccatctgtaaagaggtgctctctggacacctggtgcagctcattcct
atcctggtgaacggcatgaagtactctgagatagacattatcctgctgaagggtgatgtg
gaggaggacgaggctgtgccagacagtgagcaggacatcaagccccgcttccacaagtcc
cgcaccgtcaccctgcagcacgagggcggagagggcgaggagggagaggacatcgatgaa
gacgacgatgatgatgacgatacattatctgactggaacctacgcaagtgttcggcggca
gcgctggatgtgctggccaatgtgttccgagacgagctgctgcctcacctgctgcccctg
ctcaagggccttctcttctcccctgactgggtcaccaaggagtctggcatcctggtgctg
ggggccatcgctgagggctgtatgcagggcatggtgccctacctcccggagctcctcccc
cacctcattgcatgcctgtgtgataagaaggccctggtgcgctccatcgcctgctggacc
ctgtcccgctacgcccactgggtggtcagccagcccccagactcccacctcaaacccctg
atgaccgagctgctcaagaggatactggacggcaacaagagggtgcaggaggccgcctgc
agtgcgtttgccaccctggaggaggaggcgtgtacagagctggtgccctacctcagcttc
atcctggacacgctggtgttcgccttcggcaagtaccagcacaagaacctgctcatcctc
tacgacgccatcggaacgctatatacgccattatttatacttattatatacatatataca
ttagtacaccacctcaaccagcctgtgagtctggattttcacttagttagcaaactaatg
acattctgctgaagggacaacatgttggggaaaagcagcaagctgaagatggagcacaag
gatctctttccacttctggagtgcctgtcgtcagtggccacggccctgcaaagtggcttc
ctgccctactgtgagcctgtctaccagcgctgtgtaaccctggtccagaagaccctcgct
caggccatgatgtacaaccagcaccctgaccagtacgaagctcctgacaaggacttcatg
attgtggccctggacctgctgagtggcctggccgagggcttggggggcagtgtggaccag
ctggtggcccgcagcaacatcatgaccctgctcttccagtgcatgcaggaccctatgcca
gaggtgagacagagctcctttgccctgctgggtgacctgaccaaggcctgcttccctcat
gtcaaaccctgcattgccgagttcatgccgatcctgggcctgaacctgaacccagagttc
atctctgtgtgtaacaatgctacctgggccattggcgagatcgccatgcagatgggagca
gacatgcaaccctatgttgggctggtcctcaacaacctggtggagatcatcaacagacct
aacacacccaagaccctcctggagaatacagccattacgatcggcaggctgggctacgtg
tgtccacaggaggtgtctcccatgctgcaacagtttatcagaccctggtgcacatcgttg
aggaacatcagggacaatgaggagaaagactctgcgttccgtggaatctgcatgatgatt
ggagtcaaccccgctggagtggttcaggacttcatcttcttctgtgatgctgtggcctcc
tgggttagtcctaaggacgatctgagagacatgttctacaagatcctccatggcttcaag
gaccaggtgggcgaggagaactggcagcagttctcagaacaattcccccctctgctgaag
gagaggctgtcggcctgctatggcgtgtag
DBGET
integrated database retrieval system
