Oncorhynchus keta (chum salmon): 118374865
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Entry
118374865 CDS
T09424
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118374865 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118374865 (nfrkb)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
118374865 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
118374865
NCBI-ProteinID:
XP_035617228
LinkDB
All DBs
Position
6:complement(15748049..15773044)
Genome browser
AA seq
1274 aa
AA seq
DB search
MDALDHMLTDPLDSGEGSDGRITEECMLGNCQVSLPEDLLEDPEIFFSVLSESTWSEVLT
DDQRQHLRQLLPHFQEDNTCEQDSTISKLFNKQNFCFGNPLHLAQKLFQDGHFNPEVVKY
RQLCAKSQKKRQLNSLQQYYHKLLKQILVSRKELLELAVRSGPDIAVNRKYPTQTHGEVQ
EQRVRGRVCRILREVKTECGDSNASSDDDDTASWLPTPQSPSSPTPTVSVRVLPSLSTQD
MKTTDKQELGEKDMRAMLRRHREKRRRQPDHPDLMTSDIRLGDMMSRVNIGRKGSMMTLF
DLALPKRKMREERRKKKMRTIKVESEDPCEALMPSEAPAPTVNITATLPETPVTPLPSVK
EEPMEEVQNSPVMVEEIAVSFFNLLENILKLDGLASTTMLEEKVQQWQTSPASSLNPWFS
SASCWSEMVLPALHFLAGETKVGMLVLPSGFTPYVAFRENSQRWKWIGPSQDGEKDLSAL
CQLWVDSKDLVVVKTECEELTEMTSPTPRVSWTDFVVRPSTGDERHVFQVQEQQRYDQPH
KAFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNG
EGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRD
RGQEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKEGGGKTPGGLEASDVGGPMSPT
PTTPTTSTPGTPKSPLAPIATTPTKAGIPDSVKTSPGVLLVSPPPMPQLGTLLSSSQSGP
QVSQPATSQHTARVVGHQSGTLPQVRVVSSQTAGGQHATLVHQTPHQIRVPVTMGTKGIT
QAVVSLPLRTQSAGSPIQVQASRGQTTLSVSGLTTAVTVLKPQTASPGSPAHNPTSPAVR
QGVTSQNIIKQVAITGQLGIKSQGRPGLPITTTNLRIQGKDVLRLPPSSITTDSKGQTVL
RITPDMMATLTKSPLTTVKLTPDMLGTATTKSISATLHVAPPHSTSSPASSSGEVRTSKA
SAGTTTLLKAAGDTIRLMPTLAVTMAEQKTRTFSTVSSSDSKSGTTIRIMPGLGVIPHKQ
GQTITMTTTTGSKPVSTGAATVTIATSGLAGAKGLTVGSSASGSLTLGTATATVRQVPVT
ATVVSTQPGKLPARFTVPLSVLSQPLKSKSVMTTPMLKGNLSTNISSLGRNIILTTMPAG
TKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVPAQQLQQRSAAGSPKSMSTVVVTTA
PSPKRAPDPPPPTQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacttgatcacatgctgaccgaccccctagactcaggggagggcagtgatggg
cgcatcactgaagagtgcatgttgggaaactgtcaagtgagtcttccagaagacctgctt
gaggatcctgaaatattcttctctgtgctgagtgaaagcacctggtctgaagtactgaca
gatgaccagaggcagcatctccgtcaactgttaccacactttcaagaagacaacacttgt
gagcaggacagcaccatcagcaaactcttcaacaaacagaacttctgcttcggaaacccc
ttgcaccttgcacagaaactgttccaagatggccatttcaatccagaagtggttaagtac
agacaactgtgtgccaagtcccagaagaaacgccagctgaactcgttgcagcagtactac
cacaaactccttaaacagatcctggtctctagaaaggaactgctagagttggctgtccgc
agtggccctgacattgcggtgaacagaaagtatcccacccagacacatggtgaggtgcag
gaacagagggtcagaggaagagtgtgccggatactgagggaagttaaaactgagtgtgga
gacagcaatgcctcatctgacgatgatgatacagcctcttggctgccaacacctcaatct
ccttcctctccaacgcccacagtctctgtcagggttttgcccagtctctccacccaggac
atgaagaccaccgataagcaagaactgggagagaaggacatgagagccatgctacggaga
catagagagaagagacgacgacaaccggatcatccagacttgatgacttctgacatccgc
ctgggtgacatgatgtctagagtgaacataggtcgtaaaggctccatgatgacactgttt
gacctggctctgcctaagaggaaaatgagggaggagaggagaaagaagaagatgaggaca
attaaagtggagtctgaggatccctgtgaggctctgatgccttcagaagccccagctcca
acagttaacatcacagctactctgcctgagaccccagtcactccactgcccagtgtcaag
gaagagccgatggaggaggtgcagaacagccctgtcatggtggaggagattgcagtgagc
ttcttcaacctgctggagaacatcctaaaactagacggcctcgccagcaccaccatgttg
gaggagaaggtccaacagtggcagacatctccagctagttccctgaacccctggttctcc
tcggcctcctgctggtcagagatggtgctgccggccctgcacttcctggctggggagact
aaagtcggtatgttggttcttcccagtggcttcactccctatgtggcgttcagggaaaac
tcacagcgatggaaatggattggtcccagtcaggatggagagaaggatttgagtgctctg
tgtcagctgtgggtcgactccaaggacttggttgtggtcaagacagaatgtgaagaacta
acagagatgacttctcccacccctagagtcagttggactgacttcgtggtgcggcccagc
acaggagacgagaggcatgttttccaagtgcaggagcagcagcggtatgaccagccacac
aaagccttcaccttcagaatgcatggctttgagtctgtggtggggcctgttaagggggtc
tttgacaaggagatgtctctcaacaaagccagagaacacactctgctgcgctccgaccgc
ccagcttatgtcaccatcctctccttggtgcgggacgcagcagcccggctgcccaacgga
gaggggaccagagctgagatctgtgagctgctcaaggactctcaattcctggcaccagat
gtcaccagtgctcaggtgaacacggttgtgagtggggctctggacaggctgcactatgag
aaggacccctgtgtgaagtatgacatcggccgcaagctgtggatctacctgcaccgtgac
cgcggtcaggaggagtttgagaggattcaccaggctcaagctgctgctgccaaggccaga
aaggctctgcagcagaaacccaaacctgcgtctaagcctaagtctggaagtaaggagggg
ggtggtaagacccctggaggcctggaagcaagtgatgtggggggtcccatgtccccaact
ccgaccacccccactaccagcacgcctggaacccccaaatcacccctcgcccctatagcc
acaacccccaccaaagctgggatcccagattcagtcaagaccagtcctggtgttctattg
gtgtctcctcctcccatgccccagctggggaccctgttgtccagcagccagtctggcccc
caggtctctcagccagctacctcccaacacacagccagggtagtgggccaccagtcaggc
actctcccacaggtacgagtggtttcttcccagacagcaggaggacagcatgccacactg
gtgcaccaaacccctcatcaaatcagagtgccagtcaccatgggaaccaagggcatcaca
caggctgtggtgtcattaccactgaggacccagtctgctggtagccccatccaggtgcag
gcatccagagggcagacaaccctgtcagtgtcaggcctgaccactgctgttactgtactc
aaacctcagactgcatcccctggcagcccagcacacaaccctacctcccccgctgtccgt
cagggagtcaccagccagaacatcatcaaacaggtggctatcacaggccagttgggcata
aagtctcaaggtagaccgggtcttccaataacgactaccaatcttcgcatccagggcaag
gatgtgctccgcctgcccccctcctccatcaccacagactctaaaggacagacggtgctg
cggatcactcctgacatgatggccaccctaactaagtcccctctcaccaccgtcaaactc
acccccgacatgttaggcactgccactaccaagagcatatctgctactctccatgtagcc
ccaccccactccacctccagcccagcctcctcctcgggtgaagtccggaccagcaaggcc
tctgctggcaccaccaccctgttgaaggctgcaggggacactatccgcctgatgcccacc
ctagcagtcactatggccgaacagaagaccagaaccttctccaccgtctcctcgtctgac
tcgaagagtggcaccaccatacggatcatgcccggcctcggggtcatcccacataaacag
ggccaaaccatcaccatgacaaccaccactggcagcaaaccagtctccactggagccgcc
actgtcaccatagccaccagcggactggccggagctaaagggttgacggtgggatcttct
gcctcaggctccctgactctgggaacagccacagctactgtccgccaggtccccgtcaca
gccacagtggtgtccacacaaccagggaagttaccagctcggttcacagtgcctctgtct
gtcctcagccaaccactgaaaagtaagagtgtgatgaccacgcccatgctgaaaggaaac
ctcagtaccaatatcagcagtctgggcaggaacatcatcctcaccaccatgcctgccggt
accaagctgatagctgggaacaagccagtcagctttgtcacggctcaacagttacagcag
ctgcagcagcagggacaggccacacaggtgcggatccagacggtgccagcccagcagctc
cagcagcgctctgcagcaggctcccccaagtcaatgtccactgtcgtagtcaccaccgca
ccctcacccaaacgggccccggacccgccaccaccaacacagtga
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