Oncorhynchus keta (chum salmon): 118374870
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Entry
118374870 CDS
T09424
Symbol
si:dkeyp-117b8.4
Name
(RefSeq) E3 SUMO-protein ligase ZBED1 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118374870 (si:dkeyp-117b8.4)
04121 Ubiquitin system [BR:
oke04121
]
118374870 (si:dkeyp-117b8.4)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
118374870 (si:dkeyp-117b8.4)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118374870 (si:dkeyp-117b8.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
Sgf11
Motif
Other DBs
NCBI-GeneID:
118374870
NCBI-ProteinID:
XP_035617240
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Position
6:15715313..15719108
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AA seq
909 aa
AA seq
DB search
MEGYKPLKGSLYGSFGFKLDAKGILTDKSIVYCFHCEQSFSYHRSKTSLQYHLRKKHSLI
TKATPSEDVESDSEITVISDNSNMDFRGYPLSSSLGPNLRRRGDRGPPGLVLDRRKSTVW
NYYIQLNEMYVECNICKRQLSFHNSTTTMREHLVRKHNIRDNGPPVLHNTVVALAPIPAT
SLQPMAQPRFPCNISTTSTTANTFMFQPDLHVVVKEEQQDADLSPEQGTAKRSRITCAPP
DVGGGANANPVCSRDLESSSSNTGLLYSENNHFGDSSRSGTCIKESNDKRTGFLTDLILE
VVYRDLQPLSVVEERGFRLLLSCLEPQYPVPSPSQLGSLIWHRYDVLKLQLQQCLQSGLA
PRGITLCTEYWRSVAGCEVGASGRVFLTVSAHFIDKDWRLARCELQTRPMTVIRERACGS
GLPQFGDTLKAVLSDFHLPQSSVFCVVHDTPKTSEARGTANMGFQKENQIAGPGQSPQDL
PESWVALHCAGEALKLCIQEGLWMEPVRHALSEARRIISHFQHDTPAAAALIHKAEAANK
AGACLALDDPGHWATTIDMCESLLGLKWVVSSVLEEQKAAPNLVDHQWRLLQELVPVLKT
MRIAASFLSEDINVSISALMPCLHGVFRVLRQHIAESSCPVARGVMETVQSGMERQWRLG
EEEALLDSPAVLSSFLDPRFKELRFLSPHARSKLHDKVKELLSAQAQMEAEEISRERDKG
GDNGEEGRERGVTKMRLLTESSSIVHLQPTSYNQVSPVAKTMYDILLGEDPTERMPEIHQ
QLENYIAEPLCKRSLSPLHWWHSKEHRFPAVARLARTFLAIPTTAVAADRAFAPRETTVA
QRRAILGPQHLDHILFLHQNSDYVEKLMGGSTVHGERGSDKNGAKKKRETLYQSLVSYES
KTWVGGEEL
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctataaaccactcaaaggaagtttatatggaagttttggctttaaattagat
gcgaaaggaatcttaacagacaaaagcatagtttactgtttccattgcgaacagagcttt
tcctaccaccgcagcaaaacaagcttgcaataccatttgcgaaaaaaacattctctcatc
actaaagctacacctagtgaagatgtagagtccgactcggaaatcacagtgatctctgac
aactctaacatggatttccgagggtacccgttgtccagcagtctgggaccaaatttgagg
aggaggggggatcggggaccaccaggactggttctggatagacgcaagtctacagtttgg
aattattatatccagcttaatgagatgtatgttgagtgtaatatatgcaagagacagttg
tcttttcacaacagcactacgactatgagggagcaccttgtccgcaaacataatatacgt
gacaatggtccacctgtactccataacacagtggtggccttggccccgattccagctaca
tcacttcagccaatggcccagcccagattcccctgcaacatctccactacatctactact
gccaacacattcatgttccagccagatttgcacgtagttgtaaaagaggagcagcaggat
gctgacttatctcctgaacaagggacggccaaacgttcacgaatcacatgtgctccccca
gatgtaggaggcggtgccaatgccaaccctgtctgcagccgagatttggaatcgtcaagt
tcaaatactggattactatacagtgagaacaaccactttggtgatagcagtcgcagtggc
acttgtatcaaggaatccaatgataagcgaactggcttcctgactgacctaatattagaa
gtggtgtacagggacttgcagccactgtctgtggtggaggagaggggatttcgtcttcta
ttgagctgcttagaaccacagtacccagtgccatctccctctcagctcggcagccttatt
tggcatcgctatgatgttcttaaactgcaactgcagcagtgtcttcagtctggcctggca
ccacgtggcataacactttgcactgaatactggaggtcagtagcaggttgtgaggtggga
gcaagcggccgggtgttcttaactgtaagtgcacattttattgacaaagactggcgcttg
gcccgttgtgagctgcagacccgtcccatgaccgttatcagagagagggcttgtggaagt
gggttacctcaatttggtgacaccctaaaggcagttctctctgacttccatctccctcag
agctctgttttctgtgttgtgcacgatactcccaagacctcagaggctagagggactgca
aatatgggatttcagaaagaaaatcaaattgctggaccaggccaatcgcctcaggatctc
ccagagagctgggtagcattacactgtgcaggggaagccctcaaactctgcatccaggaa
ggactatggatggaacctgtcagacatgctctttctgaggcccgcaggattatttcacat
ttccagcatgacacacctgctgctgccgctctgatccacaaagcagaagctgctaataaa
gccggtgcttgtctggcgctggatgacccagggcactgggcaactactattgacatgtgt
gaaagtctgctagggctgaaatgggtggtgagctctgttctagaggagcagaaagctgct
ccaaatttagtggaccaccagtggcgtctcctccaggagctggtgccagttcttaagacc
atgcgcatcgctgcctcctttttgagtgaggacataaatgtgtccatctccgcccttatg
ccgtgcctgcatggcgtattccgtgtcctaaggcaacacattgcagagagcagctgccct
gtggctcgaggagtcatggagaccgtgcagtcaggaatggagcgacagtggagactgggt
gaagaggaggccttactggacagccctgccgtcctctcctcattcctggacccgaggttt
aaggagctgcgcttcctcagcccacatgcacgtagtaagctgcacgacaaggttaaagaa
ctgttatctgctcaagcgcaaatggaggcagaggaaataagcagagagcgtgataaagga
ggtgataacggcgaagagggaagggaaaggggagtgactaagatgagattgttgacggag
agttcatcaatcgttcatctgcagcccacttcctataatcaagtgagcccagtggccaaa
accatgtacgacatactgctaggagaggatcccactgagcgaatgcctgagatccaccaa
cagctggagaactacattgcagagcctttgtgcaaacgtagcctgtcacctctccactgg
tggcactctaaggagcatcgcttccctgccgtggccagacttgcccgtacatttctggct
attcctactacggctgtggctgcagacagagcttttgctcctagagagactactgttgct
caacgcagggccattctggggccccagcatttggatcatattcttttccttcaccagaac
agtgactatgtggagaaactgatgggagggtctacggtgcatggagaaaggggcagtgac
aagaatggagccaagaagaaaagagagactctgtatcagtctttagtgtcctatgagagc
aagacttgggtgggaggggaggagttgtga
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