KEGG   Oncorhynchus keta (chum salmon): 118374926
Entry
118374926         CDS       T09424                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04137  Mitophagy - animal
oke04140  Autophagy - animal
oke04144  Endocytosis
oke04145  Phagosome
oke04148  Efferocytosis
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118374926
   04145 Phagosome
    118374926
   04140 Autophagy - animal
    118374926
   04137 Mitophagy - animal
    118374926
   04148 Efferocytosis
    118374926
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118374926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118374926
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118374926
   04031 GTP-binding proteins [BR:oke04031]
    118374926
Membrane trafficking [BR:oke04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    118374926
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118374926
  Exosomal proteins of other body fluids (saliva and urine)
   118374926
  Exosomal proteins of colorectal cancer cells
   118374926
  Exosomal proteins of bladder cancer cells
   118374926
GTP-binding proteins [BR:oke04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    118374926
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA cobW ATP_bind_1 nSTAND3 PduV-EutP AAA_16 NTPase_1 Septin AAA_22 AAA_24 AAA_7 DUF5992 AAA_5 ATPase_2 SRPRB NACHT ABC_tran NB-ARC
Other DBs
NCBI-GeneID: 118374926
NCBI-ProteinID: XP_035617311
LinkDB
Position
9:24520638..24524985
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRSSSSSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacatctctgatgaaccagtatgtaaataagaggttcagtaaccaatacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggatgacaggctggtcaccatgcag
atctgggacacggctgggcaggagcggtttcaatctctgggtgtggcgttctaccgtggg
gctgactgctgtgtgctggtctatgatgtcacggcgcccaacacctttaagactctggac
agttggagggatgagttcctgatccaggccagccccagagacccagataacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacaacaaagcgtgcccag
gcctggtgtgccagtaagaacaacatcccctactttgagaccagtgccaaggaggccatc
aacgtagatcaagcattccagaccatcgcccgcaacgccctcaaacaggagtctgaggtg
gagacgtatgactttccagaccagatcaaactgagagatgaccggtcctcctcctccagc
gacggctgctcctgctga

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