Oncorhynchus keta (chum salmon): 118375003
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Entry
118375003 CDS
T09424
Name
(RefSeq) glutamate receptor ionotropic, kainate 5-like isoform X1
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118375003
04082 Neuroactive ligand signaling
118375003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118375003
Ion channels [BR:
oke04040
]
Ligand-gated channels
Glutamate (ionotropic)
118375003
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
118375003
NCBI-ProteinID:
XP_052346026
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All DBs
Position
31:complement(24277335..24482792)
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AA seq
1071 aa
AA seq
DB search
MPALPALLLSIHFSSFLLVTMAPRSGSQATLLSSVRMAAILDDQSVCGRGERLALALARE
NINSVMEGGARARVEVDIFELLRDSQYETTDTMCQILPKGVVSVIGPANSPASGSTVSHI
CGEKEIPHVKIGPEETPRLPYLRFASVSLYPSNEDLSLAVAAILRSFSYPSASLVCAKAE
CLLRLEELVRRFLISRETLSIRMLDDSLDPTPLLKEIRDDKVATIIIDANASISYLILKK
ASELGMTSAFYKYILTTMDFPLLRLDDIVNDQSNIIGFSMFNTTHPFYLEFIRSLNLSWR
EGCDLIYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPQIWQHGTSLMNYL
RMVEYDGLTGHVEFNSKGQRTNYTLRILEKQRRGHREIGIWYSNNTLAMNATSLDINVSE
TLANKTLIVTTILESPYVMRKGNYQEYQGNDQYEGFCVDMLRELADILKCSFRMKLVDDG
LYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMTLGISILYRVHLG
RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLQGHKDMLENQY
TLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWMFTLIIISSYTANLAAFLTVQRMEV
PIESPDDLADQTNIEYGTIHGGSTMTFFMNSRYQTYQRMWNYMHSKQPSVFVKSTEEGIA
RVVNSKYAFLLESTMNEYYRKLNCNLTQIGGLLDTKGYGIGMPLGSPFREEITMAILHLQ
ENNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAIMEFVWST
RCSSETDEVRPQSCPRRHHRPTPVSVCQEMLTEFRNAVSCKKSSRSRRRRPLGNSAALRH
PTRIALGTQRPLRLVREMRLSNGKLYSGSGPLTGGAGGPGGGVGAGGGPSDMGPGPQRLL
EDPLGANTTPPHPPQPQAAMALPRSCTHVRICHECRRIQSLRSGMGSTRIPPSSAPLPRL
PPPPPPSSSNTDSEGGGGSSPRRLPHSTPAPCLPIPPPQSSIDTDLLGKQD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcgctgctgctgtcgatacacttctcctccttcttgctagttacc
atggcaccacgctccggaagccaggccaccctgctctcctccgtccggatggctgcgatc
ctggatgaccagtcagtgtgtgggcgtggggagcggttggctctggccctggccagggag
aacatcaacagtgtgatggagggaggggctagagcccgtgtggaggtggacatattcgaa
ctgctgagggactcccagtatgagaccactgacaccatgtgccagattctacctaaagga
gtggtgtctgtgataggccctgccaacagccctgcttctggctctactgtcagtcatata
tgtggagagaaggagatcccacatgtaaagataggtccagaggagactcccaggttgccc
tacctgcgttttgcctcggtcagtctgtaccctagcaacgaggacctgagcctggccgtg
gcagccatcctgcgatccttcagctacccctcagccagcctggtctgcgccaaggccgag
tgccttctgcgattggaggagctagtgcggcgcttcctgatctccagggagaccctgtca
atcaggatgctggatgacagcctggatcccacccctctgctgaaggagatacgagacgac
aaggtggccaccatcatcatcgacgccaacgcctccatctcctacctcatccttaaaaag
gcgtcagagttggggatgacatcagcgttttacaagtacatcctcaccaccatggacttc
cccctgctgaggctggatgacatagtcaatgaccagtccaacatcatagggttctccatg
ttcaacaccacccatccattctacctggagttcatcaggagtctcaacctgtcctggagg
gagggctgtgatctcatctaccccgggcctgcgttgtcgtcagccttgatgtttgacgcg
gtgcacgttgtggtgggggcggtgagggagctcaacaggagtcaggagattggagtcaaa
cctctcagctgcacctctcctcagatttggcaacacggcaccagcctcatgaactaccta
cgcatggtggagtatgatggtctgacaggccatgtggagttcaacagtaaaggacagaga
accaactacacactgaggattctggagaaacagcgcaggggtcacagagagattggtatc
tggtactccaacaacacactggctatgaacgccaccagtctggacatcaacgtctcggaa
acactggccaacaagaccctcatcgtcaccaccatactggagagcccctatgtgatgcgt
aaggggaactaccaggagtaccaggggaatgaccagtacgagggcttctgtgtggacatg
ttgagagagctggcagacatcttgaagtgctccttcaggatgaaactggtggatgatggg
ctgtatggagcgcctgaacccaacgggtcctggaccggcatggtgggagagctcatcaac
aggaaagcagacttggcagtagcaggcttcaccatcacgtctgagagggagaaagtcata
gacttctccaagcccttcatgacgctaggaatcagcatcttgtacagagtccacctgggg
aggaagccggggtatttctccttcctggaccccttctctccggctgtttggctcttcatg
ctgctcgcctacctggctgtcagctgtgtgctcttcctggctgcaaggttgagtccctat
gagtggtacaacccccacccgtgtctgcaggggcacaaggacatgctggagaaccagtac
accctagggaacagcctgtggttccctgttggaggcttcatgcagcagggctctgagatc
atgccccgtgccctgtccacacgctgcgtctcaggggtctggtggatgtttactctgatc
atcatctcctcctacacggccaacctggcagccttcctgaccgtccagaggatggaggtg
cccatcgagtctcctgacgacctggccgaccagaccaacatcgagtatggcactatccac
ggggggagcaccatgactttcttcatgaactcgcgctaccagacataccagcgcatgtgg
aactacatgcactccaagcagcccagtgtgtttgtgaagagcacggaggagggcattgcc
cgcgtggtcaactctaaatatgccttcctcctggagagcaccatgaatgagtattaccgc
aaactcaactgtaacctcacccagattggtggtctgctggacaccaagggctacggcatc
ggcatgccactgggatctccattcagagaggagatcactatggccatcctgcacctgcag
gagaacaacaggctggagatcctgaagaggaggtggtgggagggaggacagtgccctaaa
gaagaggaccacagagccaagggtctgggcatggagaacattgggggtatcttcgtggtg
ttgatctgtggcctcatcatcgctgtgttcgtggccatcatggagtttgtgtggtcgacg
cgctgctcttcagagacagacgaggtacgccctcaatcctgccctcgccgacaccacaga
cccaccccagtgtctgtctgtcaggagatgctcaccgagttccgaaacgctgtctcttgt
aagaagagttcccgttcccgtcgtcgccgccccctgggcaactctgcggccctccgccac
cccacccgcatcgccctggggacccagcggccactccgcctcgtacgggagatgcgcctc
agcaacggcaagctctacagcggctcaggacccctgactggtggagcaggggggccagga
gggggtgtaggggctggtggaggtccctcagacatgggccccgggcctcaacgactcctg
gaggaccctctgggggccaacaccacccctcctcacccgccccagccgcaggccgccatg
gcgctccctcgcagctgcacgcacgtcaggatctgccacgagtgcaggaggatccagagc
ctgaggtcagggatggggtccacgaggatccccccctcatctgcacccttgccccgcctg
ccccctcctcctcccccctcctcctccaacacagacagcgaggggggtggtgggtctagc
ccccggcggctcccccacagcacccctgcaccctgcctacctataccacccccacagagc
agcatcgacacagaccttctggggaagcaggactaa
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integrated database retrieval system
