Oncorhynchus keta (chum salmon): 118375009
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Entry
118375009 CDS
T09424
Name
(RefSeq) remodeling and spacing factor 1-like isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118375009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118375009
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
118375009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
118375009
NCBI-ProteinID:
XP_035617424
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Position
1:32536083..32554440
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AA seq
1365 aa
AA seq
DB search
MAALAAAQGSNPGLCPSFAVVCSFLERYGQALDLPELTFPQMERYLRDTSTVPKPLVELH
VKLLRKLGKSVSADKWERYLAKVCQDINSSWAWELEHKGYQDLSMECKTSILKYLCEIQF
DDNLKFKTLVNEEEAEAMRLQPLGRDRQGLMYWLQTDAQHNIRLYTEEQDDWDGSTWRCI
VRTRNDLADALDLLKTQLDPEHKEKEEGETERKKEMDKDKEGGSIFAKTVERGRGHTEEG
EAGGEVKEEEEEKARQKRKAEEDKNKSKEREKEEEEDKREKSRSSTYPESTSTDDNMASL
AEKENPTKSEPLFSVKEENIAVEMKEEKEMKKCDEKEEGETQSVRKEERSEVIDNRVSTI
TALVKEETQMLNNSPSNAVSVVMAPVSATTKQEVPPVKEEAERALRTDQQAKIPLKKREL
FGANRHHSNTHHNNDMHSNQHNNNSQSSSTSSSIIVRNPSVTHTKEEQLGRQSAPPGGLA
VPLPEELTNGGAPLNGLGGLTGGIGHVGVICRSASQQQDGGLFCTDRTRPGAEEGAERAS
APDKERSRQSVLVRKSPGWGETGAPTPLEPRGQERQAGGEERERKEKGERSRERLGEDGI
EKARERLDGDLSGERDDNTKEKEEKEKKTTLHMEKREGCHGTEEEEKKSTSGKKEQESES
SQTVEGQRDQGEALSTDTPAHARVRGAGHGAADRPGPLEASSELQKEGIRLKIKIPPNQR
IENVREEEEKAEEQGDGRSLRRSARICRPSPIKVKSQDAPPGVRREEEEEKTAQWQKKRA
NPEGQSRTVKSRRRQRGPRWSNTRAKRCKPNEGGEEGEERGRKEERGREGSICDSDDSSQ
SEEMPNEDPCSHCGLPNHPELILLCDSCDSGYHTACLRPPLMVIPEGEWFCPPCQHKLLC
DRLEEQLQNLDCALKKRDRAERRRERLVYVGISVENIIPQEGEEEEEKLVKKKDAKNTKN
LGRRSTRTRKCISYRFDDFDDAIDEAIEEDVRDEDGGEVGQGKDIATILSEEGKEKRGPT
TAQAPPTRSRKRRRLNDLESDSTAAESEEEFQLSASTEEEEFVASGDEEAASDVDSFASD
PGFVSQSTRAQRRAPKQRTSRTAAKCKKLPRRQRRGWGEEEESEEEEEEEMETSDLSDSD
GDRKRCGLRRGRKREVNYRETSESECSQATTNKDKAKPRRRRLSSSNSDESSHSRESEEE
EKRMRGKRRREEVEESRTRGKKRRGETMGRGKRRKVLIEQRRKRLALLKKSRPSTKDEED
DNDEGESESSSEEDRPVRKRLNRIDSDEEEEKEGKNEDEEEEDEEEKKLSKPSSKDKESN
SPNGQQASRGSTQPGAESAALPRDRAARAGQNRSNSPPPPDQSDA
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttagcggcagcgcagggctcaaaccccggtctctgtcccagtttcgcagtg
gtctgctcgttcctggagcgctacggacaagccctggacctccccgaactcacgtttccg
cagatggagaggtatctccgggacacatcgacagttcccaagccactggtggagctgcat
gtcaagctcctgaggaagcttggcaagtctgtgtctgcagacaagtgggagaggtacctg
gctaaggtatgccaggacatcaacagtagctgggcttgggagctggaacacaagggctac
caggatttgagcatggagtgcaaaaccagcatcctcaaatacctgtgtgagatccagttt
gatgacaacctgaagttcaagacgttggtgaacgaggaggaggcggaggcaatgaggttg
cagcccttgggcagagacagacagggcctgatgtactggctgcagactgacgcccaacac
aacattcgcctgtatacagaggaacaggacgactgggacggatccacctggagatgtatc
gtcagaacccggaacgacttggccgatgctctggacctcctgaagacccagctggaccca
gaacacaaggagaaagaggagggagagacggagagaaagaaagagatggacaaagataag
gaggggggatccatctttgccaaaactgtggagagggggagaggacacacagaggagggt
gaagctggaggagaggtaaaggaggaggaagaggagaaggcaagacagaagaggaaggct
gaggaagacaagaacaagagtaaagagagggagaaggaggaagaggaggataagcgagaa
aagagtagatcatctacctacccagaatccactagtacggatgacaacatggcatcgtta
gcagagaaggaaaacccaaccaagtctgaaccattattctcagtgaaagaggaaaacatt
gcagttgagatgaaggaagaaaaggaaatgaaaaaatgtgatgagaaagaagagggagag
acacagagtgtgaggaaggaggagaggtcagaagtgattgacaacagagtgagcaccatc
accgcgctagtcaaagaggagacccaaatgcttaacaactcccctagcaacgctgtctcc
gtcgtcatggcgcccgtctcggcaacgacaaaacaggaagttcctcctgtgaaggaggaa
gcggagcgggccctgaggaccgaccagcaggccaagataccactgaagaagagagagctc
tttggcgctaaccgtcaccatagcaacacgcatcacaacaatgacatgcacagcaaccaa
cacaacaacaacagccaaagcagcagtactagcagtagcatcattgtccgtaacccttca
gtaacacataccaaggaggagcagctggggaggcagtcagcgccacctgggggcctagct
gtcccactgccagaggagctgaccaatgggggggctcccctaaacgggcttggagggctc
acagggggtataggacatgtgggggtcatttgcaggtcagcctcgcagcaacaagatggt
ggattgttctgtacggacagaaccagacctggggcagaggaaggggctgagagggccagc
gctccagacaaggagaggagcaggcagtcagtcctggtgaggaagagtcctggctgggga
gagactggagccccaacacccctagagcctagaggacaggagagacaggcaggaggagag
gagagggaaaggaaggagaaaggagagagatccagggagagattaggagaggatggaatt
gagaaagcaagggagaggttagatggagacctgtctggagagagggatgacaacacaaaa
gagaaagaagagaaagagaaaaagaccaccctccatatggagaaacgcgagggatgccat
ggaacagaggaagaggagaagaagagtacttcaggaaagaaggagcaggagtcagagagc
agccagactgtagaaggacagagggaccagggagaggccctcagcacagacacaccagcc
catgccagggtgaggggagctgggcatggagcagcagaccggccgggtccccttgaggcc
tcctctgagctgcagaaagaagggatcaggctgaagataaagatccctcccaaccagagg
atagagaacgtgagagaagaggaggagaaggcggaggagcagggagatgggaggtctctg
cggagatcggctcggatctgcagacccagcccaatcaaggtgaagagccaagacgcaccc
ccaggagtgaggagggaagaagaggaggagaagactgctcaatggcaaaagaagagagca
aaccctgagggacaaagcaggactgtaaagagcagacgaagacaacgaggcccccgctgg
tcaaacactcgagcgaagagatgcaaaccgaatgagggaggagaggagggggaggagaga
gggagaaaggaggagagagggagggagggaagtatttgtgactcagatgactctagccaa
tcagaggagatgcctaatgaagatccctgcagccactgtggactcccaaaccaccccgaa
ctgatcctgctttgtgattcatgtgatagtggttaccacaccgcctgcctcagaccccct
ctcatggtcatacctgagggagaatggttctgcccaccctgccaacacaaactgctgtgt
gacagactagaggagcagctgcaaaatctggattgcgctctgaagaaaagagaccgagct
gagaggaggagggagcgtctggtgtatgtgggaatcagtgtggagaacatcattcctcag
gaaggggaggaagaagaggagaaactggtgaagaagaaagatgcaaaaaataccaaaaac
ctgggaaggaggtctaccagaaccaggaagtgtatcagctacaggtttgatgactttgat
gacgccattgatgaagcgatagaggaagacgtcagagatgaggatggaggagaggtgggg
cagggtaaggacattgccaccatcctatcagaggaggggaaggagaaacgaggaccaacc
acagctcaggcccctcccaccagaagcaggaaaagaaggagactcaacgacctggagagc
gacagcacggctgcagagagcgaggaggagtttcagctcagcgccagtacggaggaggag
gagtttgtagcgtcaggtgatgaggaagcagccagtgatgtggacagctttgccagcgac
ccgggcttcgtaagccagtccacacgggcacagagacgggcacctaaacagagaacctcc
aggaccgcagcaaagtgcaagaaactcccacgcagacagaggagaggatggggagaggag
gaggagagtgaagaggaggaggaagaggagatggagaccagtgatttgagtgacagcgat
ggggacaggaagaggtgtggtttaaggaggggccggaagcgggaggtgaattaccgcgag
acgtcagaatccgagtgttcccaggcgaccaccaataaggataaggctaaaccccggcgc
cgtcgtctctccagctcaaacagcgatgaatcctcccattcgagagagtctgaggaggaa
gagaagagaatgaggggaaagaggcggagagaagaggtggaggagagtagaacaagggga
aagaagaggagaggagagacgatgggccgagggaagcggaggaaggtgttgatagaacag
cggaggaaacgtctagctctgctgaagaaaagcagaccctccactaaagatgaggaggat
gataacgatgaaggggaatcggagtcgtcatccgaggaagatcgtcctgtccgcaaacga
cttaaccgcatcgactctgatgaagaggaggagaaagagggaaaaaatgaggacgaggaa
gaagaggatgaagaggagaagaagctgagtaagccgtcatcaaaagacaaggaatcaaac
agccctaatggacagcaggcctctagaggctcaacacagcctggggctgagagtgcagcc
ttacccagggacagagcagccagagctgggcaaaacaggtctaacagccccccacctcct
gaccagtcagacgcatga
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