Oncorhynchus keta (chum salmon): 118375068
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Entry
118375068 CDS
T09424
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 homolog B-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118375068
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118375068
Factors involved in mRNA localization
Other mRNA localization factors
118375068
mRNA cycle factors
Stress granule specific factors
118375068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF7636
Motif
Other DBs
NCBI-GeneID:
118375068
NCBI-ProteinID:
XP_035617454
LinkDB
All DBs
Position
4:43481806..43491434
Genome browser
AA seq
590 aa
AA seq
DB search
MDELAVEVRGTSGAFYKGYLKDVHESAVTVSFENNWQPERQIPFHDVRFPPPTGFQKEIN
ESDEVEVCAVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLDRLRPVNP
NKTATKNSFLKIHLDVPEDLLQMCSKDSHKDFKKAVGAFNVTYDSDKRQLVILSVNEITT
KRAQMLSDMHFRSLRTKLSLMQRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHG
ANIQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSFLEFSEDVIKVPRNLVGKVIG
KNGKLIQEVVDKSGVVRVRIEAENDKKPPPVDEGMVPFVFVGTKESISNAKVLLDYHLNY
LKEVDQLRMERLQIDEQLRQIGGGGPRAPGTGRPDNKIFIVDNGGLGMMGMGSQRGAKPF
SRGGGGRGRRGGPPFTSGTNSEASNASETESDHKDELSDWSLAPTDELTGGFPKRPDTRK
RGGGGPRGRGGRGRGGFKAEDIQWTESRSRNTRDPKLRPQEDSLQIRVDSNNERSVHAAA
RGPPGPAGDGIVPGANRQRPIKERPIKKEKQEGPSGESTAVPPVVMNGVS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagctgttgaagtcagggggacgagtggggctttttacaaggggtatttg
aaggatgttcatgaaagtgctgtcaccgtgtcctttgaaaacaattggcagccagaacgt
caaattcccttccatgatgttcgatttcctccacccacaggttttcagaaagagataaac
gagagtgatgaagttgaggtatgtgctgtttattctagggctaatgataaagagccatgt
gggtggtggctggcgaaggtccggatggtgaagggagagttttatgtcatagagtatgca
gcttgtgatgccacgctcaatgaaatagtcacattagataggttacggcctgtcaaccca
aacaagacagctacaaaaaactccttcctgaaaatccacctagacgtcccagaggacttg
ctgcaaatgtgttcgaaagactctcataaagattttaagaaggcagtgggagcattcaat
gtcacttatgactcagacaaaagacagcttgttattctgtctgtgaacgagattacaacc
aaaagggcgcagatgctgagcgacatgcatttccggagcctgcgcaccaagctgtcccta
atgcagaggaacgaggaggctagccgccaactggagagctctcggcagctggcatctagg
ttccatgagcagtttgtggtccgagatgacctgatgggtctggccatcgggacccatggt
gccaacatccagcaggccaggaaagtacctggggtcaccaccatagacctggacgaagag
acctgcaccttccacatctatggcgaggatcaagaggcagtgcgcaaggctaggagcttc
ttggaattttctgaagatgtcatcaaagtaccaaggaatttagtggggaaagtcattgga
aaaaatgggaagttgatccaggaagtagtggataaatctggtgttgttcgagttcggatc
gaggctgagaacgacaagaagccacctccagtggacgagggcatggtgccgtttgtcttt
gtgggtacaaaggaaagcatttccaatgctaaagtactgttagactatcatctcaattat
ctgaaggaggtggaccagctgcgcatggagcggctgcagatagatgagcagctgaggcag
attgggggaggaggccccagggccccggggactggacggcctgacaacaagatcttcatt
gtagacaatggcggcctaggcatgatgggcatgggctcccagagaggagcgaagccgttc
agcaggggaggaggaggccgtggacgacgcggtggtcccccttttacctccggcaccaac
tctgaggcttccaatgcgtctgagaccgagtcggaccacaaggacgagctgagtgactgg
tctctggcccccactgacgagctgacagggggcttccccaaacgacccgatacacgcaag
agagggggaggagggcctcgcggacggggagggagaggaagaggaggcttcaaagctgaa
gacatccagtggactgagtcacgttcacggaataccagagaccctaagctaaggcctcag
gaagattctttgcagatccgagtggacagtaacaatgagaggagtgtccatgctgcagcc
agaggtccccctggccccgcaggcgacggaattgtccccggagcaaaccgacagagaccc
atcaaagagcgacctatcaagaaggagaagcaggagggccctagtggtgaatccactgct
gtgcccccggtggtgatgaacggggtgtcgtag
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