Oncorhynchus keta (chum salmon): 118375164
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Entry
118375164 CDS
T09424
Name
(RefSeq) SR-related and CTD-associated factor 4-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118375164
03041 Spliceosome [BR:
oke03041
]
118375164
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118375164
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
118375164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118375164
NCBI-ProteinID:
XP_052324640
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All DBs
Position
18:48884631..48932810
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AA seq
858 aa
AA seq
DB search
MDSVNAFNLELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVYGPRFQKNFTPTFQNLYLCPHDDKSKIIRVLNLWQKN
AVFEMDVVQPLLDMAAGSLAPTPSPQEDLQAQPQVPSASIASVQTPVSSASIAATLPQVS
RASIAAALPQLPPQLQNPEALAAVAQLFQSGQGHELQKILQRFQPGQQTPPVVPNTMADQ
NHPHVVQGQHNTHHPPLNTHQTHPTEQKNSLAKKLLDRFDYDDEPEEVKREEMNPLVPGN
QYDGHFPGPMQPNMEQQFQGQPGRQQTPGGGYPGLNKGYSQSQHTDQGNSREREDPSGRR
EGRQRGHGRRSRSRSGSRSPRRKRSPGSPSRKPRHSSQRSGSRSRESRWNSPRSRSQERK
EREKDKDRRQKGLPSIKSQTLSVCTTTLWVGQLDKKTSQQDVMCLLEEFGQIDSINMIPP
RGCAYIVMVHRQDAYRALHKLGRGSFKVNQKAIKIAWALNKGIKATHKKFWDVERGVTYI
PWSKVKMEELEGSREGGMLDADTLCPEWGDDVKELTKPGGLNNGGGVDAMETEGAATAHV
QVPPVQPIGSVGGPPGPPTPSLTPSGPPSFLPADFNPTQMPPGFPPPVVGGPRSTKDDSG
SKDKAGGSGGLSGPSDAPDSQLGAPGPGAVMSPPGSAVLLGPRMAMMTMQPRSGLPPPQL
QPPFAPHLPPPNMPPMMMGSRGPNPMFPPRGGPPGGFRMPMGHQSMEDFPHGPPRHPFQP
GPPRHPFQPGPPGEEGGNWEGGRHFRGERPGFGGHDRDWGRFGEQVRGFPRGGRGGGWSR
GGPEGRDHFMNRQDRFER
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtcaacgctttcaacttggagttattctccatgattgacatgaagcctcca
atatcacgagcaaagatgatgtcagtcactaaatcagcaataaaggctatcaagctatac
aagcatgtcgtccagattgtggagaagttcatcaagaagtgtaagccagaactgaaggtt
cctggtctatacgtggtggattccatagtccgacagtcccgacatcagtttggagtggat
aaggacgtctatggacccaggttccaaaagaacttcaccccgacattccagaacctctac
ctctgtccacatgatgacaagagtaagatcatccgcgttctcaacctgtggcaaaagaat
gctgtatttgagatggacgtcgtccagcccctgttggacatggctgctggatccttagcc
cctactccctccccccaggaggacctccaggcccagccccaggtgcccagtgcctctata
gcatcagtccagaccccagtctctagtgcctccatagcagcaaccctgccccaagtctcc
agggcctccatagcagcagccctgccccagctccccccacagctccagaacccagaggcc
ctagctgccgtggcacagcttttccagtctggacagggacacgagcttcagaagatcctc
cagaggttccagccagggcaacagactccccctgtggttccaaacaccatggctgaccag
aaccacccacatgtggtccaaggccagcataatacacaccacccaccgttgaacacacac
cagacacatcctacagagcagaagaactcactagctaagaaactcctggaccgttttgat
tatgacgacgaaccagaagaagtgaagagagaggagatgaatccccttgttccagggaac
cagtacgacggccattttcctggtccgatgcagcccaacatggagcaacagtttcagggc
cagcctgggagacagcagacacctggtggaggataccctggtctgaacaagggctacagc
cagagccagcacactgaccagggaaactccagagaaagagaagatccgtctgggaggagg
gaggggaggcagcggggtcacggcaggaggtcacgctccagatctggatctcgttctccc
aggagaaagaggtcccccggttctccctctcggaaaccccgacactcctcccagcgctct
gggtcccgctccagggagagtcgctggaactcgcctcgctcccgctcgcaggagaggaag
gagagagagaaggacaaagaccgtagacagaaaggtctgcccagcatcaagagccagaca
ctcagtgtttgcaccacgactctgtgggtgggccagctggacaagaagacttctcagcag
gacgtcatgtgtttactagaggagtttgggcagatagactccatcaatatgatacctcct
cgtggatgtgcctacatagtgatggtccacaggcaggatgcctacagagctctacacaaa
ctcggcagaggatccttcaaggtcaaccagaaggctatcaagattgcgtgggccttgaac
aagggtataaaggcgacccataagaagttctgggatgtagagcgaggcgtcacctacatc
ccctggagcaaggtgaagatggaggagctggaggggtccagggagggaggcatgctggac
gcagacacactctgtccagagtggggagatgacgtgaaggagctgactaaaccaggagga
ctgaacaacggaggaggagtggatgccatggaaaccgagggagctgccaccgcccatgta
caggtgcctccagtccagccaatagggtctgtgggtggtccccctggccccccaaccccc
tctctcacccccagtggacccccttccttcctgcccgctgacttcaaccccacacagatg
cctccaggtttccctccgccagtggtgggaggaccaaggagcaccaaagatgactcgggg
tctaaagacaaggctggagggagtggtggcctctctggcccctcagacgctccagacagc
cagctgggagctccagggccaggggccgtgatgagtcctccaggttcagcagtgttactg
ggtcccaggatggccatgatgaccatgcagcctcgttcaggactaccaccccctcaactc
cagcccccttttgcccctcacctccctccccccaacatgcccccaatgatgatgggctcc
aggggccccaaccccatgtttccccccagggggggccctccaggtgggttcaggatgccc
atgggccaccagtccatggaggactttcctcacggaccccccagacatcccttccagcct
ggaccccccagacatcccttccagcccggaccccccggggaagaaggtggcaactgggag
ggcgggagacacttcaggggcgagaggccagggttcgggggacatgacagggattggggg
aggtttggggagcaggtgagagggtttccgagaggaggaagaggagggggttggtccaga
ggtgggcctgaggggagagaccacttcatgaatcgacaggatagatttgaacggtga
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