Oncorhynchus keta (chum salmon): 118375205
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Entry
118375205 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 25-like
KO
K12822
RNA-binding protein 25
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118375205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118375205
Spliceosome [BR:
oke03041
]
Complex A
U1 snRNP components
U1 related factors
118375205
Complex B
118375205
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
118375205
NCBI-ProteinID:
XP_052352131
EnsemblRapid:
ENSOKEG00005048981
LinkDB
All DBs
Position
35:complement(5245847..5300558)
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AA seq
882 aa
AA seq
DB search
MSYPPHLNRLPQLPPGICPPQFAGFPQGVPAGTPMIPVHMGIMTSAPAVMVPTTVSMVQM
PPGPRKDLNPARVKENQEGGSGDPTTTVFVGNISEKASDMLVRQLLAKCGLVLSWKRVQG
ASGKLQAFGFCEYKEPESTLRSLRLLHELLLGDKKLLVKVDAKTKAQLEEWKARKRNANG
GAKSEDGPKEEEDEEEVLDEDTKRRDQIVKGAIEGLIREYGSELNAPSQDGDNQPRKKKR
EKKEEEDINVMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEQERQEIDKDRRERDKER
ERERERRDREREKEREKEKERNDNNNKERERDRDRDRERIDRDRERARERERGRGRGREE
GVTGDPGWERNRWKERSETGWYEVNAETRFRNIDRSRSRERSRDEKKHDREEDQEEAYER
RKLERKMRDKETAYQERLKNWEMRERKKTRDYEKENQREDERRREMTKEGKRLKEFLEDY
DDDKDDLKYYRGSALQKRLRDREKETELDDRDRKREKEEHDQIRQRLLAEGHPDPEAELQ
RMEEEAERRRQPPVKPEEEVQQEKPNREREHREREHREREHREREHREREHRERDHHRDR
RGADRPPLQHLQPQSDDDLEEGEELDDCDREDSSDARPNPNLKPTMRPITSAPSVSSGSG
GATPNSPGNESPCGIIIPHENSPEARPTEEQHPKIGLSLKLGASPNHQIHTGSKRKKLAN
VDSVFNKFGEEEADEAPRKRKLVPLDYGEDDKSLGLDGAEVPGGKGGQNTEEKRKHIRSL
IEKIPTARPDLFNYPLDWTAVDSTLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMSH
GTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLGK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccccctcacctgaaccgcctcccccagttgccccccgggatttgccctccc
caattcgcggggttcccccagggagtcccagcaggtacgcccatgattccagtccacatg
gggattatgacctctgcgcccgctgtcatggttcctaccacagtgtctatggtccagatg
cctcctggccctaggaaggatctgaacccagcccgagtcaaggagaaccaggaggggggc
agtggagaccccaccaccacagtgtttgtcgggaacatctcagagaaggcttcagacatg
ctggtcagacagctgttagcgaaatgtggcctggtcctgagctggaagagagtccaaggg
gcttctgggaaactgcaagcatttggtttctgtgagtacaaggagccagagtccaccctg
cgttcccttcgtctgctacatgagctgttgctgggagacaagaagctgctggttaaggtg
gatgctaagaccaaggcccagcttgaagaatggaaggctaggaagaggaacgccaacggg
ggagccaagtctgaggacgggcccaaggaagaagaggatgaggaagaggttcttgacgaa
gacacaaagcgtcgtgaccagatagtgaaaggggcgatcgaggggttgatccgggagtac
ggcagtgagctcaacgcaccttctcaggacggagacaaccagccccgcaagaagaagaga
gagaagaaagaggaggaggacatcaatgtgatggagatggaagatgacaaaagagacctg
atatccagggagatcagtaaattcagagacactcacaagaaactggaggaggagaaggga
aagaaagagcaggaacggcaagagatcgataaggacaggagggagagggacaaagagagg
gagcgagagagggagcgccgggaccgcgagagggagaaggagagagagaaggagaaggaa
cgaaacgataacaacaacaaggagagggagcgggacagagaccgggatcgagaacggatc
gatcgggaccgtgaacgggcgagggagagggagagggggcgagggagagggagggaggag
ggagtcacaggagatccaggttgggagcgaaacaggtggaaggagaggagtgaaacaggt
tggtatgaagttaacgctgaaacaaggttcagaaacatagaccgcagtagatccagagaa
cggagccgcgatgagaagaaacacgaccgcgaggaggatcaggaggaggcgtacgaacgc
aggaaactggagaggaagatgagggacaaggagactgcctaccaggaacgtctgaagaac
tgggagatgagagagaggaagaagactcgggactacgaaaaagagaaccaacgagaggac
gagagacggcgtgagatgacaaaagaaggcaagcgcctgaaagagttcctggaagattat
gacgatgacaaagacgacctgaaatactacaggggtagtgctttacagaagcgtctgaga
gaccgtgagaaggagacggagctggatgatagagacaggaagagggagaaggaggagcat
gatcagattagacagagactgttagctgagggacacccagaccctgaggccgagctgcag
aggatggaggaggaggcagagcggaggaggcagcccccagtgaagccggaggaggaggtg
cagcaggagaaaccaaaccgagagagggagcaccgagagagggagcaccgagagagggag
caccgagagagggagcaccgggagagggagcaccgagagagggaccaccacagggacagg
agaggagcagacaggcctcctctccagcaccttcaaccccaatcagacgatgacttggag
gaaggggaggagcttgatgattgtgaccgggaggactcatcagatgccaggccaaaccca
aacctgaagcccacaatgcggccaataacatcggccccctcggtgtcgtcgggcagcggc
ggcgccacacccaactcccccggcaacgagtctccctgcggcatcatcatccctcatgaa
aattctcctgaagcccggcccactgaagaacagcatcccaagattggcctcagcctcaaa
ctgggcgccagccccaaccatcagatccacactgggagtaaacgtaagaagctggccaac
gtcgacagcgtcttcaacaagttcggcgaggaggaggcggacgaggcgcctcgtaaacgt
aagctggttccactggactacggcgaggatgataagagcttgggtctggacggggcagag
gtacctggagggaaaggagggcaaaacacagaggagaaacgaaaacacatcaggagtctc
attgagaagatccctacggccagaccggatctgttcaactaccctctggactggactgca
gtggactcgactctgatggagcgtcgcatcaggccctggatcaacaagaagattatagag
tacatcggagaggaggaagctacgctagtggactttgtctgttcgaaggtgatgtctcac
ggcacaccgcaggggatcttggatgatgttgccatggttctggacgaagaggccgaggtg
ttcatagttaaaatgtggaggttgttgatctacgaaacggaggccaagaagattggtctg
gggaaatga
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