Oncorhynchus keta (chum salmon): 118375303
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Entry
118375303 CDS
T09424
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118375303 (ythdc1)
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118375303 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
118375303
NCBI-ProteinID:
XP_052373501
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All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MAVDRRDDKEGELNVLDDILTEAPDQDDELYNPESEHHVNQKKGSKRKNDRGDDHDLKRL
RPSAHTTTRQATKRSAPSAGGKKLVNLRGVRHPSEYKTEDYYDDRKTHSIRAGGAQRGDP
PKAAHLDKPLGRRREPDRQRIKPLMPELTTEKLMRPSEGSVGRVSTSSKEEAEEASDQET
GSTAESSEGDRSNMEGEEVMEEEEEEEEEEEEGEKGPEEDEEEEEEEYEQEEGDQRVVNE
PPDYDTRSEASDSQSDSVSFSEGESVHSGSGSDASGSEKKHEKLSSSVRAVRKDQTSKLK
YILRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVRESGKF
QGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIHWICRRELPFTKTAHLSNPWNEHK
PVKIGRDGQEIEPGCGMQLCMLFPQDESIDLYQVIHKMRHKRRMPSEPRSRGRPPHREPA
RGDLGRRRSEEYDIHNRKRPRIDYPAEFPQRPGFMPVPRNPPVDRRFPTGVRRDVFLNGS
YNDYMREFHHTIGPPPPWQGMAPYPGMEQPPHHPFYQHHPPPPQAHPPYTGHHPVPHDAR
FREKRVGRSFSSTLHDYDMRVDDFLRRTQAVVTGRRSRPRERDRQRERERPRDARRDRDR
DRGRERDRERDRIRDREKERGRYRR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgacagacgagacgacaaagagggagagctcaacgtgctggatgacatcctc
accgaggccccggaccaggatgacgagctctataatcctgagagtgagcaccacgtcaac
cagaaaaaaggatctaagaggaagaatgaccgaggggatgaccacgatctgaaacgtctc
cggccctcggctcacaccaccaccagacaggccactaaaagatctgccccctcggctggc
gggaagaaactggtcaacctcaggggggtgcggcacccctccgaatacaagaccgaagat
tattacgacgaccggaaaacccattccatccgagctggtggggcgcagaggggggaccct
cccaaagcagcccaccttgacaagcctctgggccgcaggagagagccagacagacagagg
atcaagcccctcatgcctgagctaaccacagagaagctgatgcgtcccagtgaggggagt
gttggcagggtcagcacctcctccaaggaagaggcagaggaggcatcagaccaggagacg
ggcagcacggctgagtcctccgagggagaccgatccaacatggagggagaagaggtgatg
gaggaggaagaagaagaagaggaggaggaggaggagggagagaagggcccagaggaagac
gaggaagaggaggaggaagagtatgaacaggaggaaggggatcagagagttgtgaacgaa
ccgccggattacgacactcgcagcgaagccagcgactcccagtctgattcagtgtcgttc
tctgagggggagtctgttcactctgggtctggatctgacgcctcaggttctgagaagaag
catgagaagctatcctcctctgttcgagccgtccgcaaggatcagaccagcaagctgaag
tacatcctacgagatgcacgctttttcctgatcaagagcaacaaccatgagaacgtctcc
ctggccaaggctaagggggtgtggtcaactctgcctgtgaacgagaagaagctgaacgcc
gccttccgttctgcccgcagcgtcatcctggtcttctccgtcagggagagtggaaagttc
caaggttttgccaggctgtcctcggagtcccatcatggagggtctcccatccactgggtc
ctgcctgctgggatgaacgccaagatgctgggtggggtgttcaaaatccactggatctgc
agacgggagttgccgttcactaaaacggctcacctttccaacccgtggaacgaacacaag
cctgtaaagatcggccgagatggacaggagatcgaaccagggtgtgggatgcagctgtgc
atgctgttcccccaggacgagagcattgacttgtatcaagttattcataaaatgcgacac
aagcggaggatgccttcggagccgcgttctcgaggacgcccgccgcacagagaacccgcc
cgaggcgacctgggaaggcgtcggtccgaggaatatgacattcacaacaggaaacgccca
aggattgactatccagccgagttcccacagagaccaggctttatgccagttccacgtaac
ccgccagttgaccggcgcttcccaacgggagtaagaagagatgtgtttctcaatgggtcc
tacaacgattacatgagagagttccaccacaccattgggcctcctcctccttggcaagga
atggcaccgtaccctgggatggagcagccacctcaccacccgttctaccagcaccatcct
cctcctccccaggcacatcccccgtacactgggcaccaccctgtaccacacgacgcccgc
ttcagggagaagagagtcggacgttccttcagctctaccctgcatgactacgacatgcgg
gtggatgacttcctgagacggacccaggccgtggtgacaggtcgccgcagccgccccaga
gaacgagaccggcagagggagcgagaacggccccgggacgcccgccgggaccgcgacaga
gaccgtggacgcgaacgtgaccgagagagagaccggatcagagaccgggagaaggagagg
gggcgctacaggagataa
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