Oncorhynchus keta (chum salmon): 118375319
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Entry
118375319 CDS
T09424
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118375319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118375319
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
118375319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
Rad17
AAA_5
AAA_21
AAA_7
AAA_29
AAA_28
AAA_25
Dsc3_C
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
118375319
NCBI-ProteinID:
XP_052368014
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MGREDGDMPDSLPTIPEEVFAKGYPNLAFHEDKKPQEWMTEGQPTVDTERKPKKGLGRKK
KEPAKAVGFFQLFRYATGCEVLLMIIGLLCAALHGIALPLMCVVFGQMTDSFVQSGQQLN
LTANFPVEEIRALLNSTDGCIQIPGVDIEALMTRRAYYFIGIGCAVFLLGTFQVMLFLLT
ATKQTKRIREKYFHAILHQQMSWFDTHQIGVLNVRLTDDINTINEGLGDKICVFVQFFCT
FLSGFIIGFIFGWKLTLVILAVSPLLAGSAAVWSKILATLTSKELSAYAKAGAVAEEILV
AIRTVVAFNGQKKAVERYERNLEDAKNFGIKKAITTNVSMGFTQFVIFGAYALAFWYGTK
LSVDEPENYTIGKTITVFFSVMIGAFSLGQGAPNLEAIAKARGAAYEVYNTIDQPRPIDS
SSKEGHKPDCVKGDIEFKNIHFSYPSRKDVKILQGVNLTVPRGKTIALVGASGCGKSTTI
QLLQRFYDPDSGEITLDGRDIRTLNVKWLRENMGIVSQEPVLFGTTIAENIRYGREDATD
EDIERAVREANAYDFISKLPDKLNTMVGERGAQLSGGQKQRIAIARALVKNPKILLLDEA
TSALDTQSESVVQAALDKARAGRTTIVIAHRLSTIRTADVIAGFSNGEVVEQGTHRELMA
KKGVYYSLVMQQSQGKPEEDEEDPVEEDNPPKYEDLDSVLYDSSDMDELEVGNEEGIENG
GFEKNSISSGRVEMKTTRRKSKKSKKDKKKEKKPDEAPDISFTRILALNKPEWPYMLVGT
LSSLVGGAVYPCVAIIFAKIIGVFSEVDPEVKRQKTMMFSLLFLLIGGVAFVTYFLQGYM
FGKSGELLTMRLRRQVFHAMMRQEIGWFDDNDNAVGVLTTRLATDASLVKGATGSRLGLA
TNTVCALTIAIVVAFIHSWQLTLLILACVPFLIGANFIQMRAMAGHASKDQGALEQSGKI
STETVENFKTVVGLTREDVFFHKFMDSLERPYQNGLVKAPIYGLTFAVAQAIPYMVNAAI
FRFGSWLIAHCHTEYENVFLVYSVIIFAAMNIGESASFAPDFAKAKVAAGRILGLLEKKP
EIDIYSEEGEKPTDFVGDIEFRGIHFAYPTRQNVRVLQGLNVSVGPGQTLALVGESGCGK
STSIQLLERFYSPAEGQVLVDGLDTKTLNLSWLRSQLGLVSQEPILFDCSISENIQYGDN
SREVSQDEIEEAAKNANIHDFIMGLPEKYNTRVGDKGTQMSGGQKQRIAIARALVRQPKV
LLLDEATSALDTESEKIVQQALDAARQGRTCIVIAHRLSTIQNADQIAVIQYGQVTEQGT
HTDLMAKGGAYYALVNAQVNH
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggggagagaggatggggacatgccagactctctaccaaccatccctgaggaggtattt
gcaaaaggctaccccaacctggccttccatgaggataagaagcctcaagagtggatgaca
gaggggcagccaaccgttgacacggagcgcaagccaaagaagggcctcggaaggaagaaa
aaagaaccagccaaagcagtgggatttttccagttgttccgctacgctactggttgtgag
gtgctcctgatgataatcggcctgctatgtgctgccctccacgggattgccctgcccctt
atgtgtgttgtgtttggacagatgaccgacagctttgtacaaagtggacagcagctcaac
cttacagccaatttccctgtggaggagatcagagctttattgaactcaactgacggatgt
attcaaattcctggagttgatatagaagctctaatgactcgacgtgcctattacttcatt
gggatcggttgtgctgtgttcctgctggggacctttcaggtgatgttgttcttgttgaca
gccaccaaacagaccaaacggatccgggagaaatacttccatgccatcctccaccaacag
atgtcctggtttgatacacaccagataggagttctcaacgtcaggttaacagatgacatc
aacacaatcaacgaaggccttggagacaagatctgtgtgttcgtgcaattcttctgcacc
ttcttgtcagggttcatcattggtttcatcttcggctggaagctaaccctcgtcatcctg
gccgtcagtcctctcctggcaggatcagctgccgtctggtccaaaatacttgccaccctg
accagtaaggagctgtctgcctatgccaaagcaggggcggtagctgaagagatactggtg
gctatcaggacagttgtggctttcaatggacagaagaaagctgtggaaaggtatgaaaga
aacttggaggatgctaaaaactttggaataaagaaagccatcaccactaacgtgtccatg
ggcttcacccagtttgtcatatttggggcgtacgccttggctttctggtacgggaccaag
ctctctgtagacgagcctgaaaactacaccattggaaaaaccattacagtcttcttctcg
gtgatgattggggcgttctctttgggccagggtgcgcctaacttggaagccatcgccaaa
gcccggggtgctgcctatgaagtctacaataccattgaccagccgcggcccatagacagc
agttcaaaggaaggtcacaaaccagactgtgtgaaaggagacattgaattcaagaacatc
cacttcagctacccctccaggaaagatgtcaaaattcttcaaggagtgaatctgacagtg
cctcgtgggaagaccatagctctggttggagccagtggatgtgggaagagcaccaccatt
cagctactgcagcgcttttatgatcccgactcaggagagattaccctggatggtcgggac
atccggaccctgaatgtgaagtggctgagggagaatatgggtatcgtcagtcaggaacct
gtgctattcggaacaaccattgcagaaaacatccgctatggcagagaggatgccacagat
gaggacatcgaacgggccgtgagggaggccaacgcgtacgacttcatctccaaactcccc
gataagctgaacaccatggtgggggagcggggagcccagctcagtggaggacagaagcag
aggatagctatcgcccgggccctggtcaaaaaccccaagatcctcctgctggatgaggcc
acctccgcgctggacacccagagtgagtcggtcgttcaggccgctctggataaggccaga
gcgggccgcaccacaatagtgatcgcccaccgcctgtccaccatcagaacagctgacgtg
atcgctggcttcagcaacggagaggtggtggagcagggaacacacagggaactgatggcc
aagaagggggtttactactctctggtcatgcagcagagtcaagggaagccagaggaagat
gaagaggaccctgtggaagaggataaccctcctaaatatgaggatctggattctgtccta
tatgactcatctgacatggatgagctggaagtgggaaacgaggaaggaatagaaaacggc
ggctttgaaaagaactcaatcagcagtggccgtgtggaaatgaagacgaccaggaggaaa
tctaagaagtccaagaaggacaagaagaaggaaaagaaaccagatgaagctccagacatc
tccttcaccagaatcctggccttgaacaagcccgagtggccgtacatgttggtaggaacc
ctgtctagcttggtggggggagccgtttatccctgtgtcgccatcatcttcgccaagatc
attggagtgttttccgaggttgacccggaagtcaaacgacagaaaaccatgatgttttcc
ctgctcttccttctcatcggaggagtggcttttgtcacctacttcctacagggttacatg
tttggaaaatcaggagagcttcttaccatgaggctgaggaggcaggtattccatgccatg
atgagacaggagattggatggtttgatgacaacgacaatgcagtgggagttctaaccacc
agattggccaccgatgcatctctggttaaaggggcgactgggtctaggttgggtctggcc
accaacacagtctgtgctctcaccatcgccattgtggtggccttcatccacagctggcag
ctcaccctcctcatcctcgcctgtgtgcccttcctcattggagccaacttcattcagatg
agggccatggcaggccacgcctccaaagaccagggtgccctggagcagtctgggaagata
tctacagagaccgttgaaaacttcaagacagttgttggattgacacgggaggacgtcttc
tttcacaagttcatggacagtctagaaagaccataccagaacggtttggtgaaggctccc
atctacggactaacatttgccgttgcccaagcaatcccttacatggtcaatgctgcaatc
ttccgctttgggtcctggcttattgctcactgtcacacagaatatgaaaatgttttcctt
gtgtattctgtgatcatatttgctgccatgaacataggagaatcagcatcttttgctcct
gactttgccaaagcgaaagtagctgcaggaagaattcttggcttgttggagaagaaacca
gagattgacatttacagtgaggagggggagaagccaacggactttgtcggggacattgag
ttccgagggatccactttgcatacccgacccgtcagaatgtgagggttctccaggggttg
aacgtgtcagtggggcctggtcagaccctggccctggtcggggagagtggctgtggtaaa
agcacctccattcaactactggagcgcttctatagccctgctgaaggacaagtgttagtg
gatgggttggatactaagaccctgaacctgtcgtggctgaggtctcagctgggcctggtg
tcccaggagcccatcctgttcgactgcagcatctcagagaacatccagtacggggacaac
agcagagaggtctcccaggatgagatagaggaggcagccaagaacgccaacatccatgac
ttcatcatgggcctgccagagaaatacaataccagggttggggacaaggggacccagatg
tctggaggtcagaaacagaggatagccatcgccagagcactggtcaggcagcctaaagta
ctgctgctggatgaagccacttccgccctggacacagagagtgagaagattgtccaacag
gccttagatgccgcccggcagggccgcacctgcatcgtgatcgcccatcgcctgtctacc
atccagaacgcagaccagatagcggtaattcagtatggtcaggtgacagagcagggtaca
catactgacctcatggctaaagggggggcttactatgccctggtcaacgcccaggtcaac
cactaa
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