Oncorhynchus keta (chum salmon): 118375334
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Entry
118375334 CDS
T09424
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118375334
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118375334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
118375334
NCBI-ProteinID:
XP_052337639
LinkDB
All DBs
Position
27:11595727..11714861
Genome browser
AA seq
1785 aa
AA seq
DB search
MHVTPVIFICALAYATAQGPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKEPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGRNWQVYRYFAYDCASVFPGISKGPLRK
VDDVTCESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELIVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHNDVPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLSTGNANGGVCDDC
LHNTMGRTCEMCKPFYYLNPSRDIRDPGVCSACDCDPDGSLNGGICDGHDEPSLGMVAGQ
CRCKDHVEGPRCDKCKSGFFGLSADHPLGCQACQCDPRGTVSERPQCDPVSGDCFCKRQV
TGRSCGQCLPEHWALSHDLNGCRDCDCDVGGATDNHCSMDNGQCRCRSHMMGRQCTQVES
GYFFMALDHYTYEAELAMLGQGCSVERREHQPERPATWTGTGFAKVPEGSSLELSINNIP
YSMEYDLLIRYESQMPQDWEEVRVTIVRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPQSICLEREISYKLHFEFSRYLNGNNVLIPGTTAANILVDSISLLPRYSSLEMFIGGGP
ASIARKQSYERYRCHDGAKSVARPQISDVCAKHITSMSAIINHGALACQCDPQGSVSSVC
EMRGGQCRCRSNVIGRRCDRCAPGTYGFGPAGCRACECSLEGAATRFCDQLTGQCPCSQG
AFGQRCDGCQAGHWGFPNCKQCLCNGHAEECHQRTGACLNCRENTGGDKCDRCANGYYGN
PVLGTGNGNRCQPCPCPDGPNSGRHFATSCHQDNRNRQVVCNCNQGYTGSRCEECAPGYY
GNPSQPGGRCQPCRCSNNIDMSDVDACDRRTGECKKCLYNTEGPDCGVCNSGYYGDASRR
NCRKCTCNFLGTAQTQCTARDECVCQRATGQCLCLPNTIGLTCDHCEPNYWNLASGRGCE
ACGCEPNNAVNPACNEFTGQCQCRDGFGGKICTDCQENYWGDPRIQCRACDCDSRGIETS
QCGQKTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVVQNLAVRTKTLSE
RAVEIQNTGLTGAYEKAFRDLEEKLARAQGIVNARNTTTEAVSSLMELIEDLRSQIGETT
DVLNHLEGDLTSVGNSNVEASNELSALEREAKELNLTSDQLHRQLDILKNSNFLGAYESI
RSSYNKSRDAERRANQSTTTTPSTVSQSADTRRKTERLVSAKKDDFNRKNAANKRALGDL
NAKAQTLDMKKINEKVCGGPGDSPCVESHCGGAGCRDDEGNRHCGGLNCNGAVAMAENAL
EKSKHAEKELNIAMREVEELFHKVADAKTKAEEAKGKAQAALDKATNTKNKVERSNNDLR
DLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKDRVRSLSNVDTIL
KQTQDDVRKAEQLLQEAKKARNRADGVKSTAETVKRALEDAKTAQAAAEKAIQRAKVDIG
ETEVRLAQIESESSSSEHDLNNAMDRLGNLGRGIDSLKLKRAKNSMAAARAEETATMARD
KANDAKQILDGELTDKYHTVQDLVDRKAKTVQEAKKTAERLRDEAKELLKDAQDKLQRLA
ELEKDYEENQKKLEGKARQLDGLEDKMKAILNDINKQIQIYNTCQ
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgacaccggtcattttcatctgtgccctagcctatgccaccgcccaggggcca
gaccacgcccacggctgtacccatggcagctgttacccagcaacgggagacctgttggtg
ggccgtgagaagagcctgaaggcctcgtctacctgtggctccaggaagaaagagccttac
tgtatcgtcagtcatctacaggatgagaagaaatgtttccagtgtgactctcgccggcca
tatgacccagtctacaataccatcagtcaccgcattgagaacgttatcacaacgtttaaa
ccacatcgcaagaagtcctggtggcagtcagagaatggaaagcctgatgtcttcattcaa
ctggaccttgaggcagaattccatttcactcatctaatcatgaccttcaagacgtttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaattggcaggtgtaccgc
tactttgcctacgactgtgcctcggtcttccccgggatatccaaaggtcccctgcgcaag
gtggatgatgtcacctgtgagtcccgctactctgacatcgagccatccacagagggagag
gccatctacagagttttggaccctgccatccacattgaggacccctacagccccaacatt
cagaatcagctgaagatcactaacctgcgtgtgaacttcaccaaactgcacaccctgggt
gacaacctgctggactcccgcgtggagatcaaggagaagtactactacgccatgtatgag
ctgatcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccacgggaggtgtgtgtgtaagcacaacaccaag
ggtctgaactgtgagctgtgtgatgacttccataacgacgtgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgcaactgtaatggtcactccaaccagtgtcac
tttgacatggcggtgtacctgtccacgggcaatgccaacggtggcgtctgtgacgattgt
ctccacaacaccatgggacgcacttgtgagatgtgtaaacccttctattacctgaacccc
agcagggacatcagagacccaggagtctgtagtgcctgtgactgtgatcctgatggttcc
ctgaacgggggcatctgtgacgggcatgatgagccgtccctgggcatggtcgctgggcag
tgccgctgcaaggaccatgtggagggacctcgctgtgacaaatgcaagtctggcttcttc
ggcctgagtgcagaccatcctcttggctgccaagcctgccagtgtgaccccaggggtacg
gtgtcagagagaccacagtgtgaccctgtgagtggggattgtttctgcaagcgccaggtc
accggacgcagctgtggccagtgtctgccagaacactgggcactgagtcacgacctgaat
ggctgcagagactgtgactgtgatgtgggcggagccaccgataaccactgctcaatggac
aatgggcagtgtcgttgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
gggtacttcttcatggctctggaccactatacctacgaggctgagctggccatgctggga
cagggctgcagtgtggagcggagggagcatcagcctgagcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttgtccatcaacaacatcccc
tactccatggagtacgacctcctcatccgctatgagtcgcaaatgccacaggactgggag
gaggtccgtgtgactatcgttcggccagggcccattcccaccagcagcccatgtggaaac
accatccctgcagacgacatgctcactgtttccctgcctgcaggatccaggtttgtcgtg
ctgcctcaatctatctgcttggagagagaaattagctacaagcttcactttgagttcagt
cgctatctgaacgggaacaatgttctcattcctggtacaactgctgccaacattctagtg
gactctatctccctcctccctcgttactcctccctggagatgttcatcggcggaggccct
gcctccattgcccggaaacagagttacgagcgctaccgctgccatgacggggctaagagt
gtggcacgcccccagatcagtgacgtctgtgccaaacacatcaccagcatgtcagccatc
attaaccatggagctttggcttgccagtgtgacccccagggttcagtcagctcagtgtgt
gaaatgcgcggaggtcagtgtcgctgtaggtccaatgtgattggacggcgctgtgaccgc
tgtgctcctgggacgtacggctttggacctgcaggatgtagagcctgtgagtgtagccta
gaaggtgcggccactcggttctgtgaccagctgactgggcagtgcccatgcagccagggt
gcgtttggccagcgatgcgatggctgccaggcaggacactggggcttccccaactgtaag
cagtgcctgtgtaacggacatgctgaggaatgccaccagaggaccggagcctgtctcaac
tgcagggaaaacactggaggggacaaatgtgacaggtgtgccaatggttactacggaaac
ccggtgctgggcacaggtaacggtaaccgatgccagccctgcccctgcccggatggccca
aacagcggaagacacttcgctacctcctgtcaccaggacaaccgcaacagacaggtggtc
tgcaactgtaaccaaggatacacaggttcccggtgtgaggagtgtgccccaggttactac
ggtaacccctcccagccaggtgggcggtgccagccgtgcaggtgcagtaacaacattgac
atgtcagacgtggatgcatgtgaccggaggacaggtgagtgtaagaagtgtctctacaac
acagagggaccggactgtggcgtgtgcaacagcggttactatggagacgcctcgcgacgc
aactgcagaaagtgcacctgtaacttcctgggcacagcgcaaacccagtgtacagcacgg
gatgagtgtgtctgccagcgtgccacagggcagtgcctgtgtctacccaacactatcggc
ctgacatgtgaccactgtgagcccaactactggaacctggctagtgggcggggctgtgag
gcctgcggctgtgaacccaacaacgctgtcaacccggcctgcaacgagttcactggacag
tgtcagtgccgtgacggatttggtgggaagatctgcacagattgccaagagaactactgg
ggcgacccaaggatccagtgtagagcctgtgactgtgactcccggggcatagagacctct
cagtgtggccagaagacaggccactgcgtgtgtcaacagggggtgtcgggcgtgcgttgt
gatcagtgtgcccggggcttctcaggccagttccctaactgccagccctgccaccagtgc
tttggagactgggaccgggtggtacagaacctggctgtccgaaccaagaccctgtcggag
cgggctgtggagatccagaacacgggcctgactggagcctatgagaaggccttcagagac
ctggaggagaagctggcacgagctcagggcatcgtcaatgcccgcaacaccaccacagag
gcagtcagcagcctgatggagctcattgaagacctcaggtctcagataggggagaccaca
gatgtactgaatcatctggagggagacctgaccagtgtagggaacagtaatgttgaggcc
agtaatgagctcagtgctctagagagagaggccaaagagctcaacctgacctcagatcag
ctccaccgccaactggacatcctgaagaactctaacttcctgggtgcatatgaaagcatc
cgaagctcctataataagtcccgtgacgcagagcggcgagccaaccagtccaccactacc
acgcccagcactgtcagccaatcagcagacacccgccgcaagacagaacgcctcgtctct
gccaagaaagacgacttcaaccgcaagaacgccgccaacaagcgagccctgggggacctc
aatgccaaggcacaaaccctggacatgaagaagatcaacgagaaggtctgtgggggccct
ggcgattccccctgtgtagagagccattgcggaggggcgggttgccgtgacgacgagggg
aacaggcactgtggaggcctgaactgcaacggtgccgtagcgatggcagagaacgccttg
gaaaagtctaagcacgcagagaaagagctgaacatagccatgagggaggtagaggagctc
ttccacaaggtggcagatgccaagaccaaggcggaggaggcaaagggtaaagcccaggca
gctctggacaaggccaccaacaccaagaacaaggtggagcgctccaacaacgacctgcgg
gacctcatcaagcagatcagggacttcctcatgcaggagggtgctgatccagacagcatt
gaaacggtggctaaccgtgtcctggagctgtccatcccagcctcaccacagcagatcaga
cacctggcagaggagatcaaggaccgggtccggagcctctccaacgtagacaccattctg
aaacagacacaggacgacgtgcgcaaggcagagcagctgctgcaggaggccaagaaggcc
aggaatcgggcagacggggtgaaatccacagcagagacggtgaaacgggcgcttgaggac
gctaagacggcccaggctgcagcggagaaggccatacagcgggcgaaggttgacatcggt
gaaacggaagtccgactagcacagatcgagtctgagtcctccagcagtgaacatgacctg
aataatgccatggatcgccttggcaacctgggtcgggggattgacagtctgaaactcaaa
cgtgcaaaaaacagcatggcagcagctcgagctgaggagacagccactatggcacgggac
aaagccaatgatgccaagcagattttagatggcgagctgacggataagtatcacacagta
caggacttggtggacaggaaagccaagactgtccaggaggccaaaaagacagcagagcgc
ctgagagacgaggccaaggagctactgaaagacgcgcaggacaagctccagagactagca
gaactagagaaagactatgaagagaaccagaaaaagttggagggcaaagcccggcagttg
gacggcctagaagacaagatgaaggctatcctcaacgacattaacaaacagatccagatc
tacaacacctgtcagtaa
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integrated database retrieval system