Oncorhynchus keta (chum salmon): 118375343
Help
Entry
118375343 CDS
T09424
Symbol
cspg4ba
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118375343 (cspg4ba)
04091 Lectins [BR:
oke04091
]
118375343 (cspg4ba)
Proteoglycans [BR:
oke00535
]
Cell surface proteoglycans
Others
118375343 (cspg4ba)
Lectins [BR:
oke04091
]
C-Type lectins
Others
118375343 (cspg4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
118375343
NCBI-ProteinID:
XP_052316808
LinkDB
All DBs
Position
14:complement(5016521..5094764)
Genome browser
AA seq
1532 aa
AA seq
DB search
MENMKFPIRSTKKLCFYAALLVSLTSDLAMGASFYGDGYVQLKTVESSNRNSLRVRFRTS
SPRGLLFLAAGHTDYLLLELNAGRLQVKLDLGSGERLLRSESSTQLNDLAWHTAELLHDR
HNVTLTTDQYSHTSLRMPGHWSQKQDLTIQDGLYVGGSGGLDKLYLPNDLTGFRGCVDQA
VFNENNMVSSLRPYAGFKSVYEVSLGCSPQFFAGGEDPVSFFSSRAYVSLPPWNVSHSQQ
EALFECVVHTSAKEGIVLYNSARQGDFVAVEIQEGLLVAIVGKGGTKTELKSLTFVNDRN
WHSVKMFFTPKTLQLTVDKETVKTSISSRSKGLQLRGSLFVGGIDDSTRSEVRKMGLVSV
LGNRVRGGSFKGCLKDMKVNGVMMGLPNAVVTKDISVGCEPEKEPEPSTTMGSTTIPTVP
NSRFDPTSVTPTPEFPMFTLARGLDKKYGANFVLLRNLVVSEGGRGSLESKHIKVLLDFK
KLGVRQSQIMFRIQEQPVHGQIRLDVDQDQEENVFSMLDLWHGRVIYIHGGSEDPEDFFT
FSIFSSSRKEVPTYLQGTRRYRYNITVTPTNDAPELSLPQGNLFVLLENSRKLLTKEVLK
ATDIDSNHTDLVFSILGNLNPDAGYLEVGDNPDTAVTTFSHSDLEEGKVNYVHTGARNSR
IVLRVSDGDKVSNTVVLRVMAIGLEYKIANNTGLEIIQGEVAVISNKHLAVQTNAVNQVV
DIRYDVVRPPRYGELQRLHSSGEWKPTGSFSQRLLEKERLRYLSTFQEIQTATATDDFKC
KVTVAGRVDTELVFPVTVKWVHYNLVRNAMADMNKVRKVTLDSQYLYATVDIVTLSEDDL
HFRVLSSPKKGQLLLVNELLKTNATFSQRNVTDLKVRYELVDRPYEDTSDTFKFQVFSKH
AQSQSYDFQISIKADVNSVFIRNDKLSIMEGESKLITKDELFAETLSTKELYYTVTSSPK
HGKLARINLSNSNASYNKILTFSNQDLLEERVMYIHDDTETTQDQFTFIASTSQESKSSV
TDDEVGSKEGTFNISIQLVNDEKPVRVVDKVFHVVRDGQRLLTLDDLCYHDADSDFSDGQ
LVYTRRGIPMGDLVLVNDTSHRLFQFTQKELEEKRVLFLHRGVNSGRFVLFVSDGKHLVS
TLLDVSAHDPFLSLGNNTGLLVQKGKEVTVTTGNFSVFTNLNVRDDSEVTYKVSEPPKNG
WLYRHGNISVEFTQHDLKKGLVSYRHDDSKNLADWFSVTVKVKGHVLNARINVKAYLESH
QRPPILQHNNTLLVEESKPVKIDGSRLEVTHEDNLPSEIVFTVKVAPLHGFLRRFVEAED
QYVGTEQTPVQTFSQEDINADNVQYQQTTPRQVNDTFLLDVSNGVTEVNSIRISVDIIPR
LIPLQVSNFTLREGGAKALTQEVLRVTNRHFSGLNFLYSLTEPSQNGYIEHSRYPGVPVL
SFTRRQVEQELIYYIHDSSETLEDNFTVVANDTGLRKQSSPCTVYIQVTAVNDQHPVITA
NRVLRVWVGSVTEIRSDDLDAQDEDTPLRSCR
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatgaaattccctataagaagcacaaagaagctgtgtttttacgcggcgttg
ttggtgtcgcttacgagcgacctggcaatgggagcctcgttctatggtgatggctatgtg
cagctgaagacagtggagtcgtcgaaccgtaactccctgcgtgttcgtttccgtacctcc
agcccccgcggcctgctcttcctcgctgccggccacacagactaccttctactggagctg
aacgctggtcgcctgcaggtgaagctggacctgggctctggtgagcggttgctgagatca
gagagcagcacccaactaaacgacctggcctggcacactgctgagctcctccacgaccgc
cataatgtcaccctaactacggaccagtactcccacaccagcctccggatgcctgggcac
tggtctcagaagcaagatcttaccattcaggatgggctgtacgtcggcgggtctggaggc
ctggacaagctctacctacccaatgacctaacgggattcagggggtgtgtggaccaggct
gttttcaacgagaacaacatggtatcgtcgttgagaccatacgctggattcaagagtgtc
tacgaggtttctttgggctgtagtccccagttctttgccggcggggaggatcctgttagt
ttctttagttcaagagcgtatgtctccctgccaccctggaacgtctcccacagccagcaa
gaggcgctctttgagtgtgtggttcacacctcggctaaagaggggattgtcttgtacaac
tcggccagacaaggggactttgtggcagttgaaatccaagaggggctgctggtggccatc
gtgggtaaaggaggcaccaagacagaacttaaatccctcacctttgtcaatgacaggaac
tggcattcagtgaagatgttctttacccccaagaccctacagctgacagtggacaaggag
acggtgaagactagcatcagctctcgctccaagggacttcagttaagagggtcgctgttt
gtggggggcattgatgacagcacgcgttcagaagtcaggaagatgggtctggtgtctgtg
ttgggaaacagagtccgaggaggttcttttaagggctgcctgaaggacatgaaagtcaat
ggggtcatgatgggtctgcctaatgctgtagtcactaaagatatatcagtgggctgcgag
ccggagaaagaaccggagccctcgaccacgatgggttcaactactatcccgactgtcccc
aactcccggttcgatcccacttcggtcacccctaccccagaattccctatgttcactctg
gccagggggctggacaagaagtacggggccaacttcgtgctgctcaggaaccttgtcgtc
tcagagggcggacgtgggtctctagagtccaagcacatcaaggtgctcctggacttcaag
aagctcggggtacgccagtctcagatcatgttccggatccaggagcagccggtgcacggt
cagatacgattggatgtggaccaggaccaagaggagaacgtctttagcatgctggacctg
tggcacggcagggtgatatacatccacggaggatcagaggacccagaagactttttcact
ttctctatcttctcttcctccaggaaggaggttcccacatacctgcaggggacgagaagg
taccgctacaacatcacagtgacccccaccaatgacgccccagagctcagcctgccccag
gggaaccttttcgtcctgttggagaattctagaaaactcctcaccaaagaggtgttgaaa
gccacagacattgacagcaaccacaccgacctggtcttctccatcctggggaacctgaac
cctgatgctggttatctggaggtgggagataaccccgacactgcagtgaccacgttctcc
cattctgatctggaggaagggaaggtgaactatgtccacactggggcgaggaactccagg
atcgtgctgagggtcagtgatggagacaaggtgagcaacacggtggttctgagggtcatg
gccatagggttggagtataagatcgccaacaacaccgggcttgagatcattcaaggtgag
gtggctgtgatcagtaacaagcacctggccgttcagaccaatgccgtgaatcaagtggta
gacatccgatatgatgtcgtcaggccacctcggtatggggaacttcagaggcttcactcc
agcggagaatggaagcccaccggttccttctctcaaaggctgctggagaaagaacgcctt
cggtacctcagcactttccaagaaatccagactgccactgctactgatgacttcaaatgc
aaggtcactgtcgcaggaagagttgacactgaactggtctttccagtcacagtgaagtgg
gtacactataacctagtcaggaacgcaatggccgatatgaacaaagttcggaaagtgacg
ttggactcacagtatctttatgccacggtggacattgtgacactatccgaggatgatctt
cacttcagagttctctcctcgccgaagaaaggacaacttctccttgttaacgagttattg
aagacaaacgcaactttcagccaaaggaatgtcactgatctcaaggtacgatacgaactg
gtcgacagaccgtacgaagacacaagtgacacgtttaaattccaagtgttctccaagcac
gctcaatcacaaagttacgatttccagatctcaataaaagctgacgtcaacagcgtattt
ataagaaatgacaaactatctatcatggagggagagagtaaactcatcacaaaagacgag
ttgtttgcagagactcttagcaccaaggagctgtactacaccgttacaagtagccctaaa
catgggaagctagcacgcatcaacctgtccaactctaacgccagttacaacaaaatccta
acgttcagcaaccaggatctcttggaggagcgtgtcatgtacatccacgacgacacagag
accactcaggaccagttcacattcatagcctccactagtcaggagtccaaatcctccgtc
acggacgatgaagtcggatccaaagaaggaacgtttaacatctccatccagctagttaac
gacgaaaagccggtgcgcgttgtcgataaagttttccacgtggtgagggacgggcagcgg
ttgctaaccctggacgatctctgttaccatgacgcagactcggacttcagcgacgggcag
ttggtctacacgcgacggggaatcccgatgggagacctggttctggtgaacgacacatct
cacaggctgttccagttcacccagaaggagctggaagagaagagagttttgttcctgcat
cgtggcgtgaactccggacgcttcgtgctcttcgtgtctgacgggaaacacttagtctcc
actctgctggacgtcagcgcccacgacccgttcctgagcctcggcaacaacacaggtctg
ttggtccagaagggaaaggaagtgaccgtaaccaccggtaacttcagcgtcttcacgaac
ctcaatgtccgtgatgacagcgaagtcacctacaaggtgtccgagcctcctaagaacggc
tggctgtatcgccacggaaacatctcagtggagtttacacagcacgacctgaagaagggc
ctcgtctcgtatcgccatgatgacagcaagaacctggcggattggttcagtgtcacggtt
aaggttaaaggtcacgtcctgaatgccagaatcaacgttaaggcttacctggagagccat
cagaggccccctatcctccagcacaacaacaccttactggtggaggagagcaaacctgtg
aagattgacgggagtagactggaggtgacccacgaggacaacctgccatctgagattgta
tttacagtgaaggtggctccgctacacgggttcctgcggcgcttcgtggaggctgaggac
cagtatgttggaactgaacagacccccgtccaaaccttctcccaggaagacataaacgct
gacaacgtccagtatcagcagacgacccccagacaggtcaacgacacattcctattggac
gtctctaacggtgtcacagaggtcaacagtatcaggatatccgtggacataatcccccgc
ctcatccctctccaggtgtccaatttcaccctgagagagggcggggccaaggccttgaca
caggaagtgctcagggtcaccaaccgacacttctctggcctcaacttcctatacagtttg
actgagccgtcgcagaacggctatattgaacattcacgttaccccggtgtccctgtgctg
tctttcaccagacgccaggtggagcaggagttaatctactacatacatgacagcagtgag
accttagaagacaacttcactgtggtggccaacgacacaggactcaggaaacagagctct
ccctgtaccgtgtacatccaggtcacagccgtcaacgaccagcatccagtcatcaccgcc
aacagggtcctcagggtgtgggtggggtcggtcacagagatccgctctgacgacctggat
gcccaggatgaggacacgcccctgaggagctgcaggtga
DBGET
integrated database retrieval system
