Oncorhynchus keta (chum salmon): 118375467
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Entry
118375467 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: FHF complex subunit HOOK interacting protein 1B-like
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118375467
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118375467
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
118375467
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
118375467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
118375467
NCBI-ProteinID:
XP_052348696
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All DBs
Position
34:4082369..4186149
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AA seq
1198 aa
AA seq
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MSWLSRLTPRGPGGRSSRNVASSSPCTADPETCLMVFENHWRQLSWVLEQQEPSGCSDDL
TAVRNHTDQMLCLLAEERPGEVGEGPPGTVPPVGPILGLVVNENVLERVVQWHLRRGLDP
DSQGSLLKLFEMLIGQSQQPLLQHKAVLQPLLGLLGACAEPQLGCPPSLENSLVLLLNQI
CVSMARAPAVLELLFRSAPAQHGPTNLLIFSLLVPFIHRDGAIGQQARDALLLVMATSAT
NQGVARYIAENSYFCPVLATGLSALYSSLPRKIEVRGDDWHALRREDWMGVSSLVLFMNS
LEFCNAVIQVAHPLVRSQLVDYVHNGFLVPVMGPALHKSSVDEMIASTAYLDLFLRSVTE
TALLKTFLRFILMHRHDNDTILDTLLTRVSSNSRLCMVSLSLFRTLLSLNCEDLMLQLVL
RYLLPCTHVMLSQRRAVRDTDLYGKSADKFLSLIPECCRLSVLPSAEREEEPAFWGKVLN
SPSSESPVHPKPSTPSRLALFMRQQSTALPFTPSPTETVPSSPRGGPSTPLSPDSPMHPV
PEGLDWESGYLEYLRDARRGVELCSWACRNWSAPYDGEDPSPNTAPLPPPPPTSNPSLAM
FPEHFSFQQGGGGGGSTSHGQQRAAVVAAARSEWSSTERDSGEWDVTIGKNNCTISLTPR
TKKRSLQREEVPLPKPLHLPPDSTSASVPDPSAAPHLPSGPSIGPHQAIFNGTSSRGRED
GCPDGRDGGMEVKKVKRDLDEQQQHGDSSQNVAVGASPTPVPTPAQSCGPLQGLHREGSG
SVTGEHSRRLTSHVQSHTQDQPAPWTPASCANSSNVSLTPQVSGPGLPEAMLSTQSVPTP
AQSCGPLTPQVSGSGLPEAMFSTQSEAVERLISELLDGAGPGEGGQQGPGDSNGQGISIE
AFTQELRELEERVRERSKGVGLLRQLEETTRDPDSEEPLPPSPLDTDLIGTGAGAAVEPK
AVGLFSPARPLGQPSAQPYTGPFMVVLFAKLENMLQNSLYVNILLTGILCQLACYPQPLL
RSFLLNTNMVFQPSVKSLIQVLGSVKNRIEVFAASHEDXPGMLRKAQRYLVARGKVDWAD
SSPMGVPTLRRSDSLVKSRKPSLGDLIMRHTNSPTRARHAAQLALAHVRDGGQSLHSALF
RGGTGGGASGLEKQVEALRVKNAVYCAVIFSEFLKELAALAQEHAVSMPFLQSHDTEE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgagctggctgagccggctgaccccccggggtccggggggcaggtccagtaggaacgta
gcctcttccagtccctgtactgctgacccagagacctgcctcatggtgttcgagaaccac
tggagacagttgtcctgggtcctggaacagcaggagccgtcgggatgtagcgatgacctc
accgcggtgcggaaccacaccgatcagatgctgtgcctcctggctgaagagcgaccggga
gaagtgggcgagggcccccccgggaccgtccccccggtgggacccatcctgggtctggtg
gtgaacgagaacgtcctggagcgagtggtgcagtggcacctgcgtcgcggattggaccca
gacagccaggggtcgttactcaagctgttcgagatgctgataggccagtctcagcagccc
ctgctccaacacaaggcggtgctgcagcctctactgggtctgctgggggcctgtgctgag
ccccagctgggctgccctccctctctggagaacagtctggtgctgctgctcaaccagatc
tgtgtgtcgatggcgcgtgcccctgcggtgttggagctgttgtttaggtcggccccggcc
caacacggtcctaccaacctgctcatcttctccctgctggtccccttcatccaccgtgac
ggagccatcggacagcaggcccgagacgccctgctcctcgtcatggcaacctccgccacc
aaccagggcgtggcacgctacatcgcagagaactcctacttctgcccagtgctggccacg
ggcctcagtgctctctactcctccctgccgaggaagatagaggtacggggggatgactgg
cacgctctgcgcagggaggactggatgggcgtgtcctctctggtgctcttcatgaactct
ctggagttctgtaacgctgtcatccaggtggctcaccccctggtccgcagccagctggtc
gactatgttcacaacggcttcctggtccctgtcatgggacccgccctacacaagtcatct
gtagatgagatgatagccagtacagcctacctggatctgttcctgcgcagcgtcacggaa
acagctctcctcaaaaccttcctacgcttcatcctcatgcatcgccatgacaacgacacc
atcctggacaccttgctaacgcgcgtcagcagcaactccaggctgtgtatggtgtctttg
agcctgttcaggactctgctctctctcaactgtgaagacctcatgttgcagctcgttctc
aggtatcttctaccctgtacccatgtgatgttgagtcagaggcgtgccgtcagggacacc
gatctctatggtaaatcagctgacaagttcctgtccctcatcccagagtgctgccgcctc
agcgtactgccctctgctgagcgggaggaagaaccagccttctgggggaaagtactgaac
agccccagctcagagtctcctgtgcaccccaaaccgagcactccgtcccgcctggccctc
ttcatgcgccagcagagcaccgcactgcccttcaccccctcccccactgagacggtcccc
tcgtccccccgcgggggccctagcacccccctgtcccccgacagccccatgcaccccgtc
ccagaggggctggactgggagtcggggtacctggagtacctcagggacgcccgtagaggg
gtagagctgtgctcctgggcctgccggaactggtcagccccctacgacggagaggacccc
tcacccaacacggcccctctaccgccccctccccccacctccaacccctccctggccatg
ttcccagagcacttctccttccagcagggaggaggaggaggtggtagtacctcccacggc
cagcagagggcagcggtggtggcagcagcgcggtcagagtggagcagtacagagagggac
agtggagagtgggacgtcaccatcggtaagaacaactgtaccatcagcctcacgccccgc
accaagaaacgcagcctgcagagagaggaggtccccctccccaaacctctccacctccct
cctgactctacctctgcctccgtccctgacccctctgctgccccccacctcccctccggc
ccctccataggccctcaccaggccatcttcaatggaacgtcgtcgaggggtcgggaggac
gggtgtccagacggccgggatggagggatggaggttaagaaggtgaagagagatttggac
gagcagcagcagcacggagactctagtcagaacgttgcagtaggtgccagcccaaccccg
gtccctaccccggcccagtcctgtgggcccctacaggggttgcacagggaagggagtgga
agtgtgactggggaacactccagacgtctaacatcgcacgtacagagtcacacccaggat
cagcctgctccgtggactccagcatcctgtgccaactcctccaacgtcagcctgacccct
caggtctctggaccgggacttccagaggcaatgctctctacccagtcagtccctaccccg
gcccagtcctgtgggcccctgacccctcaggtctctggatcgggacttccagaggcaatg
ttctctacccagtcagaagcagtggagcggctgatctcggagctcctggatggggctgga
ccgggggaggggggccagcaggggcctggagactccaacggccagggcatcagcatcgag
gccttcacccaggaactccgggagctggaggagagggtgagggagaggagcaagggggtg
gggcttctcagacagctggaggagaccaccagagaccccgactcagaggaaccactgccc
ccctcacccctggacactgacctgattgggactggggcaggggctgcagtggagcccaag
gctgtggggctgttcagccctgccaggcctctaggacagccatccgctcagccctacaca
ggtccgtttatggtggttctgtttgccaagctggagaacatgcttcagaactctctgtat
gtgaacatcttgctgacagggatcctgtgccagctagcctgctaccctcagcccctgctc
cgatccttcctcctcaacaccaacatggtgttccagcccagcgtcaagtctctcatacag
gttctgggctcagtaaagaaccgcattgaggtgtttgcagcatcccatgaggacnttcct
ggcatgctgaggaaagcccagcgctacctggttgccaggggcaaggtggactgggctgac
tcttcgcccatgggggtacccaccctgcgacgctctgattccctggtgaagagccggaaa
ccttcgctaggcgacctgatcatgcgacacaccaacagccccacgcgggcacgccacgcc
gcccagcttgccctggcgcacgtacgagacggcggccaatcgctgcacagtgccctgttc
cggggagggactgggggaggggcgtcggggctggagaaacaggtggaggctctgagggtg
aagaacgcagtctactgcgccgtcatcttctctgagttcctcaaggagctggccgctctg
gcccaggagcacgctgtctccatgcccttcctccagagccacgacactgaggagtga
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