Oncorhynchus keta (chum salmon): 118375475
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Entry
118375475 CDS
T09424
Symbol
rnf19a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF19A
KO
K11972
E3 ubiquitin-protein ligase RNF19A [EC:
2.3.2.31
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118375475 (rnf19a)
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
118375475 (rnf19a)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
118375475 (rnf19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
DUF4573
IBR_1
IBR_2
zf-C3HC4
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
118375475
NCBI-ProteinID:
XP_052327707
LinkDB
All DBs
Position
19:52161..93302
Genome browser
AA seq
999 aa
AA seq
DB search
MSVLEPLLPRGGLEPLLPRGGLEPLLPRGGLEPLLPRGGLEPLRPRGGLEPLLPRGGLEP
LRPRGGLEPLRPRGGLEPLRPRGGLELCLDVITGSVVSRTDPALWAIRDQTWRAGPGRHQ
RPPPCLTSLRLLLNTLSPQPLSPSPSLPVDAPLPGGGGASSGGEMSLQQLRGDRGGSGSE
RDLHSAASSISLPSVRKGPKKRRLSLRSLFSRRHRGDRDPKRKSQDLQVGGVDGIASVES
IHSEICHGDKTSTLSAPVVASSSSEFLECPLCLLRHARDRFPDIMTCHHRSCADCLRQYL
RIEISESRVNISCPECSERFNPHDIRIILGDQPLMEKYEEFMLRRWLVADPDCRWCPAPD
CGYAVIAFGCASCPKITCGREGCGTEFCYHCKQLWHPNQTCDAARQQRAQSLRLRTFRSS
SLNYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLS
PSGCTFWGKKPWSRKKKILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYE
GKDISKHKRNLVIAGGVTLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVS
AGNGKGVRIDFDDENEMNVGSAAAATDATSVAETRHNPSIGEGSVGGMTGSLSASGSQMD
RMGAMRDNLSENASTMALAGASITGSLSGSAMVNCYNRLEVQADVQKEQGSLSGESANVS
LGTISDNTSTKAMAGSILNYMPLDREGNLEVDMEGKQEKKLHHHSNSSSLDDASGDGRGV
GVCPSGCPHESRSSKWVKDPSSSGGKKSKGKLRTKKTSGGTKIQETREDMDAQLLEQRST
NSSEFDSLSGSLPSVADSHCSHLSEFSCSDPETSRPPPLTPCCIDLHPQRPLTSLGTDLV
TVTPLPEVENDHLENCPAASSSSSPSSATPVYTEGGVGGGMLLYIAEESLGLMRTTQEEL
DSIAVEEVLKETNNNMLDGGVVSQQPSSPVRSGCIQTEI
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgttggagccattactgccccggggtggcctggagccattactgccccggggt
ggcctggagccattactgccccggggtggcctggagccattactgccccggggtggcctg
gagccattacggccccggggtggcctggagccattactgccccggggtggcctggagcca
ttacggccccggggtggcctggagccattacggccccggggtggcctggagccattacgg
ccccggggtggcctggagctgtgtcttgatgtgattactggtagtgtggtgtccagaaca
gatccagccctgtgggccatacgagaccagacctggagagcaggcccaggccgccaccag
agaccaccaccatgtcttaccagcctgcgcctgctccttaacaccctgtccccccagccc
ctctcaccatccccctccctccctgtggatgcccccctgcctggtggaggaggagcctcc
tctggtggggagatgagcctgcagcagctgaggggggatcgggggggttctgggtctgag
agggacctccactcagcagcttcctccatcagcctgccctccgtcaggaagggccccaag
aagagacgcctctccctgcgctcgctgttcagccggcgccaccgtggggatcgagacccc
aagaggaaatcacaggacttacaggttggcggtgtggacgggatcgccagcgtggagagc
atccattcagagatatgtcatggagacaagacctcaacgctctccgcccccgttgtggcc
tcttcctcctccgagttcctggagtgtcctctctgtctcctccgccacgccagagaccgt
ttccctgacatcatgacctgccaccaccgctcctgtgcggattgcctgcgccagtactta
cgtatagaaatcagtgagtcgcgcgtcaacatcagctgtccagagtgctctgagcggttc
aacccccacgacatccgcatcatcctgggagaccagcccctcatggagaagtacgaggag
ttcatgttgagacgatggctggtggccgaccctgactgccgctggtgccccgcccctgac
tgcgggtatgcagtcattgcctttggctgtgccagctgtcctaagatcacgtgtgggcgt
gaggggtgtggcacagagttctgttaccactgtaaacagctgtggcatcccaaccagacg
tgtgatgccgcccggcagcagagagcccagagcctgaggctacgcaccttccgttcctca
tctctcaactacagccaggagagtggtgctgcagctgatgacatcaagccgtgtccgcgc
tgcgcggcttacatcatcaagatgaacgacggcagctgtaaccacatgacctgcgccgtg
tgcggctgtgagttctgctggctctgcatgaaggagatctctgacctgcactacctgagc
ccgtcaggatgtaccttctggggtaagaagccatggagcaggaagaagaagattctgtgg
cagctgggcacgctggtgggcgcaccggtgggcatcgctctgatcgctggcatcgccatc
cccgccatgatcataggcatccctgtctacgtggggaggaagattcacaatcgctatgaa
ggaaaggacatctccaaacataagaggaacttggtgatagcgggtggcgtgaccttatct
gtcattgtctcccccgtggtggcagcagttactgttggtatcggcgtgcccatcatgctg
gcatacgtctacggggtggtgcccatctctctgtgtcgcagcggtgggtgtggcgtctct
gccggtaacgggaaaggggtccgcatcgattttgatgatgagaatgagatgaacgtcgga
agtgcagcggctgcaactgacgccacatcggtggcagagaccagacacaaccccagcatc
ggagagggcagtgtggggggcatgacaggcagtctgagtgccagcgggagccaaatggac
cggatgggcgccatgagggacaacctgagtgagaatgcctccaccatggccctggctggg
gccagcatcacaggatctctgtctggcagcgccatggtcaactgttataacaggttggag
gtccaggctgatgttcagaaggagcagggtagtctgagtggggagtcggcaaatgtcagc
ttggggaccatcagtgacaacactagcaccaaagcaatggctggatccattctcaactac
atgcctctggacagagagggtaacctggaggtggacatggaggggaagcaggagaagaaa
ctacatcaccatagcaacagcagcagcctggacgacgccagcggcgatgggagaggggtt
ggagtgtgtccctccggctgcccccatgagtctcgctcctccaaatgggtgaaggacccc
tcttcctcggggggcaagaagagcaagggcaagctgaggacgaagaagaccagcggagga
actaagatccaggagacccgtgaggacatggatgctcagctcctagagcagcgcagcact
aactcctcagagttcgactcgctcagcggctccctgccctccgtagcagactcccactgc
agccacttatcagagttcagctgctctgatccggagacctccagacctcctcctctcacc
ccctgctgcattgacctccacccccagcgccccctcacctccctgggaacagacctggtc
accgtcacccccctgccggaggtggagaacgaccatctggagaactgtcccgctgcatcc
tcctcctcctcaccttcttccgcgacccccgtctacacagaaggaggggtaggaggaggt
atgctcctctacatcgccgaggagagcttagggctgatgaggacgacgcaggaggagctg
gactccatcgcggtggaggaggtcctgaaggagaccaataacaacatgttggacggaggt
gtcgtatcccagcagccttccagccctgtgaggagtggctgcattcagactgagatataa
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